Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Vps13bQ80TY5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Gm26039-201ENSMUST00000158152 144 ntBASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Vps13bQ80TY5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Actl10-202ENSMUST00000226583 1501 ntBASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Mir770-201ENSMUST00000103252 94 ntBASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Olfr129-201ENSMUST00000122318 993 ntBASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Gm37722-201ENSMUST00000193757 208 ntBASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.66□□□□□ -0.7
Vps13bQ80TY5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Gm13401-201ENSMUST00000117074 291 ntBASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Vps13bQ80TY5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Vps13bQ80TY5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Vps13bQ80TY5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Vps13bQ80TY5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Vps13bQ80TY5 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Vps13bQ80TY5 Gm4974-201ENSMUST00000209974 875 ntBASIC10.65□□□□□ -0.71
Vps13bQ80TY5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Vps13bQ80TY5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Vps13bQ80TY5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms