Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Clcn4Q61418 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Gm12441-201ENSMUST00000121806 588 ntBASIC16.41■□□□□ 0.22
Clcn4Q61418 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.41■□□□□ 0.22
Clcn4Q61418 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.41■□□□□ 0.22
Clcn4Q61418 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.41■□□□□ 0.22
Clcn4Q61418 Gm6420-201ENSMUST00000193885 723 ntBASIC16.41■□□□□ 0.22
Clcn4Q61418 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Clcn4Q61418 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.41■□□□□ 0.22
Clcn4Q61418 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Clcn4Q61418 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn4Q61418 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn4Q61418 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn4Q61418 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn4Q61418 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn4Q61418 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn4Q61418 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn4Q61418 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.4■□□□□ 0.22
Clcn4Q61418 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.4■□□□□ 0.22
Clcn4Q61418 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.4■□□□□ 0.22
Clcn4Q61418 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Clcn4Q61418 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn4Q61418 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Clcn4Q61418 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Clcn4Q61418 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Clcn4Q61418 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Clcn4Q61418 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Clcn4Q61418 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Clcn4Q61418 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn4Q61418 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.39■□□□□ 0.21
Clcn4Q61418 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.39■□□□□ 0.21
Clcn4Q61418 Nespas-201ENSMUST00000143738 1083 ntBASIC16.39■□□□□ 0.21
Clcn4Q61418 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Clcn4Q61418 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn4Q61418 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn4Q61418 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clcn4Q61418 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn4Q61418 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clcn4Q61418 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Clcn4Q61418 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn4Q61418 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clcn4Q61418 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn4Q61418 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn4Q61418 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Clcn4Q61418 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn4Q61418 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Clcn4Q61418 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn4Q61418 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Clcn4Q61418 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn4Q61418 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Clcn4Q61418 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn4Q61418 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn4Q61418 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn4Q61418 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Clcn4Q61418 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn4Q61418 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn4Q61418 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn4Q61418 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn4Q61418 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn4Q61418 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn4Q61418 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.37■□□□□ 0.21
Clcn4Q61418 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn4Q61418 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn4Q61418 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn4Q61418 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Clcn4Q61418 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn4Q61418 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn4Q61418 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.37■□□□□ 0.21
Clcn4Q61418 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Clcn4Q61418 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
Clcn4Q61418 Gm6365-201ENSMUST00000054711 744 ntBASIC16.37■□□□□ 0.21
Clcn4Q61418 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn4Q61418 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn4Q61418 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.37■□□□□ 0.21
Clcn4Q61418 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn4Q61418 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn4Q61418 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Clcn4Q61418 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.37■□□□□ 0.21
Clcn4Q61418 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Clcn4Q61418 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn4Q61418 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn4Q61418 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.36■□□□□ 0.21
Clcn4Q61418 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.36■□□□□ 0.21
Clcn4Q61418 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms