Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav2Q5R1I9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav2Q5R1I9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav2Q5R1I9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav2Q5R1I9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav2Q5R1I9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav2Q5R1I9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav2Q5R1I9 Gm715-201ENSMUST00000117865 831 ntBASIC14.21□□□□□ -0.13
Trav2Q5R1I9 Gm12382-201ENSMUST00000122005 922 ntBASIC14.21□□□□□ -0.13
Trav2Q5R1I9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav2Q5R1I9 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.21□□□□□ -0.13
Trav2Q5R1I9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav2Q5R1I9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trav2Q5R1I9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav2Q5R1I9 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.21□□□□□ -0.13
Trav2Q5R1I9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav2Q5R1I9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trav2Q5R1I9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav2Q5R1I9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trav2Q5R1I9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.21□□□□□ -0.14
Trav2Q5R1I9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Gm43183-201ENSMUST00000200632 547 ntBASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Gm42545-201ENSMUST00000202755 922 ntBASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav2Q5R1I9 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.19□□□□□ -0.14
Trav2Q5R1I9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav2Q5R1I9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Trav2Q5R1I9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav2Q5R1I9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Trav2Q5R1I9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav2Q5R1I9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav2Q5R1I9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav2Q5R1I9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav2Q5R1I9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav2Q5R1I9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.19□□□□□ -0.14
Trav2Q5R1I9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav2Q5R1I9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav2Q5R1I9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav2Q5R1I9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trav2Q5R1I9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Mir7071-201ENSMUST00000184847 69 ntBASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trav2Q5R1I9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav2Q5R1I9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms