Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-4Q5R1I0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-4Q5R1I0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-4Q5R1I0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-4Q5R1I0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-4Q5R1I0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-4Q5R1I0 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.96□□□□□ -0.01
Trav6d-4Q5R1I0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-4Q5R1I0 Gm715-201ENSMUST00000117865 831 ntBASIC14.96□□□□□ -0.01
Trav6d-4Q5R1I0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav6d-4Q5R1I0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-4Q5R1I0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-4Q5R1I0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav6d-4Q5R1I0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-4Q5R1I0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-4Q5R1I0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6d-4Q5R1I0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6d-4Q5R1I0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6d-4Q5R1I0 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.96□□□□□ -0.02
Trav6d-4Q5R1I0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Trav6d-4Q5R1I0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6d-4Q5R1I0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6d-4Q5R1I0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6d-4Q5R1I0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 Mir6982-201ENSMUST00000184354 68 ntBASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6d-4Q5R1I0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-4Q5R1I0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-4Q5R1I0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms