Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Clhc1Q5M6W3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.21■□□□□ 0.35
Clhc1Q5M6W3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clhc1Q5M6W3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clhc1Q5M6W3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.21■□□□□ 0.35
Clhc1Q5M6W3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Clhc1Q5M6W3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Clhc1Q5M6W3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clhc1Q5M6W3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
Clhc1Q5M6W3 Gm7860-201ENSMUST00000121190 879 ntBASIC17.21■□□□□ 0.35
Clhc1Q5M6W3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clhc1Q5M6W3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clhc1Q5M6W3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clhc1Q5M6W3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clhc1Q5M6W3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Clhc1Q5M6W3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Clhc1Q5M6W3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Clhc1Q5M6W3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.2■□□□□ 0.34
Clhc1Q5M6W3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clhc1Q5M6W3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clhc1Q5M6W3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clhc1Q5M6W3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clhc1Q5M6W3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clhc1Q5M6W3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Clhc1Q5M6W3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clhc1Q5M6W3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clhc1Q5M6W3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Clhc1Q5M6W3 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.2■□□□□ 0.34
Clhc1Q5M6W3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clhc1Q5M6W3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clhc1Q5M6W3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clhc1Q5M6W3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clhc1Q5M6W3 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.18■□□□□ 0.34
Clhc1Q5M6W3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clhc1Q5M6W3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Clhc1Q5M6W3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.18■□□□□ 0.34
Clhc1Q5M6W3 Gm15039-201ENSMUST00000118914 875 ntBASIC17.18■□□□□ 0.34
Clhc1Q5M6W3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.18■□□□□ 0.34
Clhc1Q5M6W3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.18■□□□□ 0.34
Clhc1Q5M6W3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.18■□□□□ 0.34
Clhc1Q5M6W3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clhc1Q5M6W3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clhc1Q5M6W3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Clhc1Q5M6W3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clhc1Q5M6W3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Clhc1Q5M6W3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clhc1Q5M6W3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clhc1Q5M6W3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clhc1Q5M6W3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clhc1Q5M6W3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clhc1Q5M6W3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Clhc1Q5M6W3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clhc1Q5M6W3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clhc1Q5M6W3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clhc1Q5M6W3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms