Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Pds5bQ4VA53 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Pds5bQ4VA53 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Pds5bQ4VA53 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC31.22■■■□□ 2.59
Pds5bQ4VA53 AC138767.1-201ENSMUST00000222661 415 ntBASIC31.22■■■□□ 2.59
Pds5bQ4VA53 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Pds5bQ4VA53 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Pds5bQ4VA53 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Pds5bQ4VA53 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pds5bQ4VA53 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pds5bQ4VA53 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pds5bQ4VA53 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
Pds5bQ4VA53 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Pds5bQ4VA53 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC31.21■■■□□ 2.59
Pds5bQ4VA53 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pds5bQ4VA53 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Pds5bQ4VA53 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
Pds5bQ4VA53 Gm11594-201ENSMUST00000122313 162 ntBASIC31.2■■■□□ 2.59
Pds5bQ4VA53 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Pds5bQ4VA53 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Pds5bQ4VA53 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Pds5bQ4VA53 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Pds5bQ4VA53 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Pds5bQ4VA53 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC31.2■■■□□ 2.58
Pds5bQ4VA53 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC31.19■■■□□ 2.58
Pds5bQ4VA53 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Pds5bQ4VA53 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC31.19■■■□□ 2.58
Pds5bQ4VA53 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
Pds5bQ4VA53 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Pds5bQ4VA53 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Pds5bQ4VA53 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Pds5bQ4VA53 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Pds5bQ4VA53 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
Pds5bQ4VA53 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
Pds5bQ4VA53 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Pds5bQ4VA53 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Pds5bQ4VA53 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
Pds5bQ4VA53 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Pds5bQ4VA53 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC31.18■■■□□ 2.58
Pds5bQ4VA53 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Pds5bQ4VA53 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC31.18■■■□□ 2.58
Pds5bQ4VA53 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC31.18■■■□□ 2.58
Pds5bQ4VA53 Gm43332-201ENSMUST00000202511 1044 ntBASIC31.18■■■□□ 2.58
Pds5bQ4VA53 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Pds5bQ4VA53 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Pds5bQ4VA53 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
Pds5bQ4VA53 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Pds5bQ4VA53 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pds5bQ4VA53 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pds5bQ4VA53 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pds5bQ4VA53 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC31.17■■■□□ 2.58
Pds5bQ4VA53 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
Pds5bQ4VA53 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
Pds5bQ4VA53 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pds5bQ4VA53 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Pds5bQ4VA53 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
Pds5bQ4VA53 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pds5bQ4VA53 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pds5bQ4VA53 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pds5bQ4VA53 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Pds5bQ4VA53 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC31.16■■■□□ 2.58
Pds5bQ4VA53 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
Pds5bQ4VA53 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Pds5bQ4VA53 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Pds5bQ4VA53 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Pds5bQ4VA53 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Pds5bQ4VA53 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Pds5bQ4VA53 Gm9194-201ENSMUST00000220749 1447 ntBASIC31.16■■■□□ 2.58
Pds5bQ4VA53 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Pds5bQ4VA53 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Pds5bQ4VA53 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC31.15■■■□□ 2.58
Pds5bQ4VA53 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC31.15■■■□□ 2.58
Pds5bQ4VA53 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Pds5bQ4VA53 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC31.15■■■□□ 2.58
Pds5bQ4VA53 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC31.15■■■□□ 2.58
Pds5bQ4VA53 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Pds5bQ4VA53 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
Pds5bQ4VA53 Golph3-202ENSMUST00000226517 2359 ntBASIC31.14■■■□□ 2.58
Pds5bQ4VA53 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Pds5bQ4VA53 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
Pds5bQ4VA53 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
Pds5bQ4VA53 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
Pds5bQ4VA53 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC31.14■■■□□ 2.58
Pds5bQ4VA53 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Pds5bQ4VA53 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC31.14■■■□□ 2.58
Pds5bQ4VA53 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
Pds5bQ4VA53 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.57
Pds5bQ4VA53 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
Pds5bQ4VA53 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC31.13■■■□□ 2.57
Pds5bQ4VA53 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
Pds5bQ4VA53 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Pds5bQ4VA53 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Pds5bQ4VA53 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC31.13■■■□□ 2.57
Pds5bQ4VA53 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Pds5bQ4VA53 Gm15853-202ENSMUST00000195518 2041 ntBASIC31.12■■■□□ 2.57
Pds5bQ4VA53 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC31.12■■■□□ 2.57
Pds5bQ4VA53 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Pds5bQ4VA53 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Pds5bQ4VA53 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Pds5bQ4VA53 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC31.11■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms