Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox18P43680 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox18P43680 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox18P43680 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Sox18P43680 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox18P43680 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.04■□□□□ 0.32
Sox18P43680 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Sox18P43680 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.03■□□□□ 0.32
Sox18P43680 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox18P43680 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.03■□□□□ 0.32
Sox18P43680 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox18P43680 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox18P43680 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox18P43680 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Sox18P43680 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox18P43680 Gm15823-201ENSMUST00000064305 670 ntBASIC17.03■□□□□ 0.32
Sox18P43680 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox18P43680 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox18P43680 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox18P43680 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sox18P43680 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox18P43680 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox18P43680 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox18P43680 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox18P43680 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox18P43680 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox18P43680 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Sox18P43680 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox18P43680 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox18P43680 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.02■□□□□ 0.32
Sox18P43680 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox18P43680 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox18P43680 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.02■□□□□ 0.32
Sox18P43680 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC17.02■□□□□ 0.32
Sox18P43680 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox18P43680 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.02■□□□□ 0.32
Sox18P43680 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox18P43680 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox18P43680 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Sox18P43680 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox18P43680 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox18P43680 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox18P43680 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox18P43680 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox18P43680 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox18P43680 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sox18P43680 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox18P43680 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox18P43680 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox18P43680 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sox18P43680 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.01■□□□□ 0.31
Sox18P43680 Gm38027-201ENSMUST00000192315 235 ntBASIC17.01■□□□□ 0.31
Sox18P43680 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.01■□□□□ 0.31
Sox18P43680 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox18P43680 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox18P43680 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox18P43680 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox18P43680 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox18P43680 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox18P43680 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox18P43680 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox18P43680 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox18P43680 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox18P43680 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox18P43680 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Sox18P43680 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox18P43680 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Sox18P43680 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox18P43680 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17■□□□□ 0.31
Sox18P43680 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17■□□□□ 0.31
Sox18P43680 Gm43514-201ENSMUST00000198852 424 ntBASIC17■□□□□ 0.31
Sox18P43680 Gm5587-201ENSMUST00000206270 674 ntBASIC17■□□□□ 0.31
Sox18P43680 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17■□□□□ 0.31
Sox18P43680 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox18P43680 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox18P43680 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox18P43680 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox18P43680 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox18P43680 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox18P43680 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sox18P43680 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sox18P43680 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sox18P43680 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox18P43680 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sox18P43680 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox18P43680 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sox18P43680 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox18P43680 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox18P43680 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox18P43680 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Sox18P43680 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox18P43680 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.99■□□□□ 0.31
Sox18P43680 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox18P43680 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox18P43680 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Sox18P43680 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox18P43680 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sox18P43680 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sox18P43680 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sox18P43680 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms