Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox5P35710 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox5P35710 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox5P35710 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Sox5P35710 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox5P35710 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox5P35710 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox5P35710 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sox5P35710 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Sox5P35710 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.46■□□□□ 0.71
Sox5P35710 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Sox5P35710 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox5P35710 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Sox5P35710 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
Sox5P35710 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox5P35710 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox5P35710 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sox5P35710 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox5P35710 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox5P35710 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox5P35710 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox5P35710 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox5P35710 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.7
Sox5P35710 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.45■□□□□ 0.7
Sox5P35710 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox5P35710 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox5P35710 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox5P35710 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox5P35710 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox5P35710 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sox5P35710 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.45■□□□□ 0.7
Sox5P35710 Gm10033-202ENSMUST00000211874 928 ntBASIC19.45■□□□□ 0.7
Sox5P35710 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox5P35710 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox5P35710 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox5P35710 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sox5P35710 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox5P35710 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox5P35710 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox5P35710 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox5P35710 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Sox5P35710 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sox5P35710 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.44■□□□□ 0.7
Sox5P35710 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox5P35710 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.44■□□□□ 0.7
Sox5P35710 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox5P35710 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox5P35710 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.44■□□□□ 0.7
Sox5P35710 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox5P35710 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox5P35710 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox5P35710 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox5P35710 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.44■□□□□ 0.7
Sox5P35710 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox5P35710 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox5P35710 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sox5P35710 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.43■□□□□ 0.7
Sox5P35710 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox5P35710 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox5P35710 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox5P35710 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.43■□□□□ 0.7
Sox5P35710 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sox5P35710 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox5P35710 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox5P35710 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.43■□□□□ 0.7
Sox5P35710 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sox5P35710 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox5P35710 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Sox5P35710 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox5P35710 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sox5P35710 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox5P35710 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sox5P35710 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox5P35710 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox5P35710 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox5P35710 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox5P35710 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox5P35710 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Sox5P35710 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox5P35710 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox5P35710 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sox5P35710 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.41■□□□□ 0.7
Sox5P35710 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox5P35710 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox5P35710 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox5P35710 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox5P35710 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox5P35710 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox5P35710 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox5P35710 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.41■□□□□ 0.7
Sox5P35710 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox5P35710 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox5P35710 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Sox5P35710 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Sox5P35710 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox5P35710 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox5P35710 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.4■□□□□ 0.7
Sox5P35710 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox5P35710 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.4■□□□□ 0.7
Sox5P35710 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms