Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn2O70591 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn2O70591 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn2O70591 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn2O70591 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn2O70591 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn2O70591 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pfdn2O70591 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Pfdn2O70591 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn2O70591 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
Pfdn2O70591 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Pfdn2O70591 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn2O70591 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.82□□□□□ -0.04
Pfdn2O70591 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn2O70591 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn2O70591 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn2O70591 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.82□□□□□ -0.04
Pfdn2O70591 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn2O70591 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn2O70591 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn2O70591 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn2O70591 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn2O70591 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn2O70591 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn2O70591 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Pfdn2O70591 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pfdn2O70591 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pfdn2O70591 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Gm11421-201ENSMUST00000122124 294 ntBASIC14.81□□□□□ -0.04
Pfdn2O70591 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.81□□□□□ -0.04
Pfdn2O70591 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.81□□□□□ -0.04
Pfdn2O70591 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.81□□□□□ -0.04
Pfdn2O70591 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.81□□□□□ -0.04
Pfdn2O70591 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pfdn2O70591 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Pfdn2O70591 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pfdn2O70591 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.8□□□□□ -0.04
Pfdn2O70591 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.8□□□□□ -0.04
Pfdn2O70591 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pfdn2O70591 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Pfdn2O70591 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pfdn2O70591 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.8□□□□□ -0.04
Pfdn2O70591 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.8□□□□□ -0.04
Pfdn2O70591 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.8□□□□□ -0.04
Pfdn2O70591 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Pfdn2O70591 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pfdn2O70591 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn2O70591 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn2O70591 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn2O70591 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.79□□□□□ -0.04
Pfdn2O70591 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn2O70591 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn2O70591 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn2O70591 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Pfdn2O70591 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn2O70591 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn2O70591 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn2O70591 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn2O70591 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pfdn2O70591 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms