Protein–RNA interactions for Protein: E9PW80

Gm3298, Predicted gene 3298, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3298E9PW80 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Gm3298E9PW80 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3298E9PW80 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.57■□□□□ 0.4
Gm3298E9PW80 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3298E9PW80 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3298E9PW80 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3298E9PW80 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3298E9PW80 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3298E9PW80 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.56■□□□□ 0.4
Gm3298E9PW80 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3298E9PW80 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3298E9PW80 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.56■□□□□ 0.4
Gm3298E9PW80 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3298E9PW80 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Gm3298E9PW80 Gm11249-201ENSMUST00000117071 859 ntBASIC17.56■□□□□ 0.4
Gm3298E9PW80 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.56■□□□□ 0.4
Gm3298E9PW80 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3298E9PW80 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3298E9PW80 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3298E9PW80 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3298E9PW80 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3298E9PW80 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3298E9PW80 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3298E9PW80 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3298E9PW80 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3298E9PW80 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3298E9PW80 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3298E9PW80 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3298E9PW80 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3298E9PW80 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3298E9PW80 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm3298E9PW80 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3298E9PW80 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.55■□□□□ 0.4
Gm3298E9PW80 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm3298E9PW80 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3298E9PW80 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3298E9PW80 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3298E9PW80 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Gm3298E9PW80 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Gm3298E9PW80 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3298E9PW80 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3298E9PW80 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.54■□□□□ 0.4
Gm3298E9PW80 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3298E9PW80 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3298E9PW80 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3298E9PW80 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3298E9PW80 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3298E9PW80 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Gm3298E9PW80 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Gm3298E9PW80 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3298E9PW80 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Gm3298E9PW80 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Gm3298E9PW80 Gm44549-201ENSMUST00000208351 577 ntBASIC17.54■□□□□ 0.4
Gm3298E9PW80 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.54■□□□□ 0.4
Gm3298E9PW80 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3298E9PW80 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Gm3298E9PW80 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Gm3298E9PW80 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3298E9PW80 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3298E9PW80 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3298E9PW80 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Gm18666-201ENSMUST00000190039 958 ntBASIC17.53■□□□□ 0.4
Gm3298E9PW80 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.53■□□□□ 0.4
Gm3298E9PW80 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.53■□□□□ 0.4
Gm3298E9PW80 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3298E9PW80 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3298E9PW80 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms