Protein–RNA interactions for Protein: A2AJK6

Chd7, Chromodomain-helicase-DNA-binding protein 7, mousemouse

Known RBP Predictions only

Length 2,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7A2AJK6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd7A2AJK6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.6■□□□□ 0.41
Chd7A2AJK6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd7A2AJK6 Gm37935-201ENSMUST00000192012 982 ntBASIC17.6■□□□□ 0.41
Chd7A2AJK6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd7A2AJK6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.6■□□□□ 0.41
Chd7A2AJK6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd7A2AJK6 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.59■□□□□ 0.41
Chd7A2AJK6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chd7A2AJK6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chd7A2AJK6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Chd7A2AJK6 Gm28659-201ENSMUST00000188013 759 ntBASIC17.59■□□□□ 0.41
Chd7A2AJK6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Chd7A2AJK6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chd7A2AJK6 Gm11355-201ENSMUST00000121120 306 ntBASIC17.59■□□□□ 0.41
Chd7A2AJK6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd7A2AJK6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd7A2AJK6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chd7A2AJK6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chd7A2AJK6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Chd7A2AJK6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Chd7A2AJK6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd7A2AJK6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.58■□□□□ 0.4
Chd7A2AJK6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Chd7A2AJK6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Chd7A2AJK6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Chd7A2AJK6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chd7A2AJK6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd7A2AJK6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chd7A2AJK6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd7A2AJK6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd7A2AJK6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd7A2AJK6 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.57■□□□□ 0.4
Chd7A2AJK6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd7A2AJK6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd7A2AJK6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd7A2AJK6 Gm7213-201ENSMUST00000215977 950 ntBASIC17.57■□□□□ 0.4
Chd7A2AJK6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.57■□□□□ 0.4
Chd7A2AJK6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd7A2AJK6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd7A2AJK6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Chd7A2AJK6 Actl10-202ENSMUST00000226583 1501 ntBASIC17.57■□□□□ 0.4
Chd7A2AJK6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd7A2AJK6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd7A2AJK6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd7A2AJK6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd7A2AJK6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd7A2AJK6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.57■□□□□ 0.4
Chd7A2AJK6 Il3ra-202ENSMUST00000223589 738 ntBASIC17.57■□□□□ 0.4
Chd7A2AJK6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd7A2AJK6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd7A2AJK6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd7A2AJK6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chd7A2AJK6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Chd7A2AJK6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.56■□□□□ 0.4
Chd7A2AJK6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Chd7A2AJK6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd7A2AJK6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd7A2AJK6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.56■□□□□ 0.4
Chd7A2AJK6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chd7A2AJK6 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.56■□□□□ 0.4
Chd7A2AJK6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.56■□□□□ 0.4
Chd7A2AJK6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd7A2AJK6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd7A2AJK6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd7A2AJK6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.56■□□□□ 0.4
Chd7A2AJK6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd7A2AJK6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd7A2AJK6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.55■□□□□ 0.4
Chd7A2AJK6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd7A2AJK6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd7A2AJK6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd7A2AJK6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd7A2AJK6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd7A2AJK6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd7A2AJK6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd7A2AJK6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.55■□□□□ 0.4
Chd7A2AJK6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.55■□□□□ 0.4
Chd7A2AJK6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd7A2AJK6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd7A2AJK6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd7A2AJK6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Chd7A2AJK6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd7A2AJK6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd7A2AJK6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd7A2AJK6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.55■□□□□ 0.4
Chd7A2AJK6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd7A2AJK6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chd7A2AJK6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd7A2AJK6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd7A2AJK6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd7A2AJK6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd7A2AJK6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd7A2AJK6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd7A2AJK6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd7A2AJK6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.54■□□□□ 0.4
Chd7A2AJK6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chd7A2AJK6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.54■□□□□ 0.4
Chd7A2AJK6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd7A2AJK6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms