Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Gm43173-201ENSMUST00000202246 593 ntBASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.8□□□□□ -0.52
Igkv1-88A0A140T8N1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Gm12821-201ENSMUST00000120022 600 ntBASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Gm38205-201ENSMUST00000192243 258 ntBASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Igkv1-88A0A140T8N1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Gm27032-201ENSMUST00000183124 1116 ntBASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Appbp2os-202ENSMUST00000206972 447 ntBASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Igkv1-88A0A140T8N1 Gm19439-201ENSMUST00000198195 2273 ntBASIC11.77□□□□□ -0.52
Igkv1-88A0A140T8N1 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Igkv1-88A0A140T8N1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Igkv1-88A0A140T8N1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Igkv1-88A0A140T8N1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Igkv1-88A0A140T8N1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Igkv1-88A0A140T8N1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Igkv1-88A0A140T8N1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms