Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav23A0A0G2JG17 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav23A0A0G2JG17 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav23A0A0G2JG17 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav23A0A0G2JG17 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.61□□□□□ -0.07
Trav23A0A0G2JG17 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav23A0A0G2JG17 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav23A0A0G2JG17 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav23A0A0G2JG17 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav23A0A0G2JG17 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav23A0A0G2JG17 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav23A0A0G2JG17 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav23A0A0G2JG17 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav23A0A0G2JG17 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav23A0A0G2JG17 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav23A0A0G2JG17 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav23A0A0G2JG17 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav23A0A0G2JG17 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav23A0A0G2JG17 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav23A0A0G2JG17 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav23A0A0G2JG17 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Fst-202ENSMUST00000223640 2612 ntBASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Gm10653-202ENSMUST00000139570 835 ntBASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav23A0A0G2JG17 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav23A0A0G2JG17 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav23A0A0G2JG17 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav23A0A0G2JG17 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.57□□□□□ -0.08
Trav23A0A0G2JG17 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms