Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gm43182-201ENSMUST00000199476 2528 ntBASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav9n-2A0A0G2JDP3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gm37179-201ENSMUST00000194862 823 ntBASIC12.96□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav9n-2A0A0G2JDP3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Gm13148-201ENSMUST00000118892 745 ntBASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.94□□□□□ -0.34
Trav9n-2A0A0G2JDP3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms