Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.1□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.09□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.09□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Rps24-207ENSMUST00000224568 714 ntBASIC14.09□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv12-2A0A0B4J1H1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.09□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv12-2A0A0B4J1H1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.09□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv12-2A0A0B4J1H1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv12-2A0A0B4J1H1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv12-2A0A0B4J1H1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms