Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv3A0A0A6YYE2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv3A0A0A6YYE2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trbv3A0A0A6YYE2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv3A0A0A6YYE2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv3A0A0A6YYE2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv3A0A0A6YYE2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv3A0A0A6YYE2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv3A0A0A6YYE2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv3A0A0A6YYE2 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Gm11421-201ENSMUST00000122124 294 ntBASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trbv3A0A0A6YYE2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv3A0A0A6YYE2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv3A0A0A6YYE2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv3A0A0A6YYE2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trbv3A0A0A6YYE2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv3A0A0A6YYE2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv3A0A0A6YYE2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv3A0A0A6YYE2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv3A0A0A6YYE2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv3A0A0A6YYE2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv3A0A0A6YYE2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv3A0A0A6YYE2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv3A0A0A6YYE2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv3A0A0A6YYE2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms