Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9d-1A0A075B699 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav9d-1A0A075B699 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9d-1A0A075B699 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9d-1A0A075B699 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav9d-1A0A075B699 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9d-1A0A075B699 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav9d-1A0A075B699 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9d-1A0A075B699 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9d-1A0A075B699 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav9d-1A0A075B699 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Trav9d-1A0A075B699 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Gm18671-201ENSMUST00000214826 683 ntBASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav9d-1A0A075B699 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Gm10033-202ENSMUST00000211874 928 ntBASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-1A0A075B699 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Gm42642-201ENSMUST00000200683 355 ntBASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-1A0A075B699 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-1A0A075B699 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms