Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav12-3A0A075B648 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav12-3A0A075B648 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav12-3A0A075B648 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Trav12-3A0A075B648 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.02□□□□□ -0.32
Trav12-3A0A075B648 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav12-3A0A075B648 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav12-3A0A075B648 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Trav12-3A0A075B648 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav12-3A0A075B648 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Trav12-3A0A075B648 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
Trav12-3A0A075B648 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-3A0A075B648 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav12-3A0A075B648 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-3A0A075B648 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC13.02□□□□□ -0.33
Trav12-3A0A075B648 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-3A0A075B648 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-3A0A075B648 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Trav12-3A0A075B648 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-3A0A075B648 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-3A0A075B648 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav12-3A0A075B648 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav12-3A0A075B648 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12-3A0A075B648 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav12-3A0A075B648 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12-3A0A075B648 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12-3A0A075B648 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12-3A0A075B648 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms