Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Col16a1Q8BLX7 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Col16a1Q8BLX7 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Col16a1Q8BLX7 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Col16a1Q8BLX7 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Col16a1Q8BLX7 AC121942.1-201ENSMUST00000224459 2891 ntBASIC7.21□□□□□ -1.26
Col16a1Q8BLX7 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Gm4845-201ENSMUST00000179202 562 ntBASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Ap3m1-208ENSMUST00000224016 764 ntBASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Olfr878-201ENSMUST00000086061 1065 ntBASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Mir546-201ENSMUST00000102105 121 ntBASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Gm7206-201ENSMUST00000117730 508 ntBASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Gm3267-201ENSMUST00000118671 473 ntBASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Gm13213-201ENSMUST00000119668 474 ntBASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Gm42542-201ENSMUST00000197978 268 ntBASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Gm45608-201ENSMUST00000210948 389 ntBASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 n-R5s88-201ENSMUST00000083173 118 ntBASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col16a1Q8BLX7 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 AC134860.3-201ENSMUST00000223564 1300 ntBASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Gm11561-201ENSMUST00000117429 417 ntBASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Gm6081-201ENSMUST00000134472 489 ntBASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Gm29240-201ENSMUST00000187248 286 ntBASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Gm37152-201ENSMUST00000193369 1175 ntBASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Gm29785-201ENSMUST00000217033 383 ntBASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 AC123067.1-201ENSMUST00000217711 462 ntBASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 AC125543.1-201ENSMUST00000222778 101 ntBASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 n-R5s62-201ENSMUST00000082780 96 ntBASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Gm42874-201ENSMUST00000198888 1774 ntBASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Col16a1Q8BLX7 AC130661.1-201ENSMUST00000218248 1680 ntBASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 AC159244.3-201ENSMUST00000222887 3153 ntBASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Gm25418-201ENSMUST00000104214 129 ntBASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Gm6382-201ENSMUST00000118873 942 ntBASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Gm27551-201ENSMUST00000184258 77 ntBASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Gm43919-201ENSMUST00000204303 364 ntBASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Gm4290-201ENSMUST00000206897 814 ntBASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Gm18205-201ENSMUST00000209215 841 ntBASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 AC121986.1-201ENSMUST00000218588 781 ntBASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col16a1Q8BLX7 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms