Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm43629-201ENSMUST00000201782 704 ntBASIC8.5□□□□□ -1.05
Cux1P53564 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cux1P53564 Gm2607-201ENSMUST00000212389 627 ntBASIC8.5□□□□□ -1.05
Cux1P53564 Gm19936-201ENSMUST00000216414 838 ntBASIC8.5□□□□□ -1.05
Cux1P53564 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC8.5□□□□□ -1.05
Cux1P53564 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC8.5□□□□□ -1.05
Cux1P53564 Gm25139-201ENSMUST00000083247 210 ntBASIC8.5□□□□□ -1.05
Cux1P53564 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC8.5□□□□□ -1.05
Cux1P53564 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cux1P53564 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
Cux1P53564 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cux1P53564 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Cux1P53564 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cux1P53564 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cux1P53564 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cux1P53564 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cux1P53564 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Cux1P53564 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Cux1P53564 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Cux1P53564 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cux1P53564 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cux1P53564 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cux1P53564 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cux1P53564 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Cux1P53564 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cux1P53564 Gm28567-201ENSMUST00000190270 693 ntBASIC8.49□□□□□ -1.05
Cux1P53564 Gm37044-201ENSMUST00000193531 693 ntBASIC8.49□□□□□ -1.05
Cux1P53564 Gm38369-201ENSMUST00000195101 693 ntBASIC8.49□□□□□ -1.05
Cux1P53564 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC8.49□□□□□ -1.05
Cux1P53564 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC8.49□□□□□ -1.05
Cux1P53564 Gm5373-201ENSMUST00000212113 1050 ntBASIC8.49□□□□□ -1.05
Cux1P53564 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC8.49□□□□□ -1.05
Cux1P53564 AC154461.5-201ENSMUST00000225429 774 ntBASIC8.49□□□□□ -1.05
Cux1P53564 AC165260.4-201ENSMUST00000225924 724 ntBASIC8.49□□□□□ -1.05
Cux1P53564 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC8.49□□□□□ -1.05
Cux1P53564 Gm43022-201ENSMUST00000197067 4268 ntBASIC8.49□□□□□ -1.05
Cux1P53564 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cux1P53564 Gm45177-201ENSMUST00000209104 2307 ntBASIC8.49□□□□□ -1.05
Cux1P53564 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC8.49□□□□□ -1.05
Cux1P53564 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Cux1P53564 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC8.49□□□□□ -1.05
Cux1P53564 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC8.49□□□□□ -1.05
Cux1P53564 AC159002.2-201ENSMUST00000228843 4874 ntBASIC8.49□□□□□ -1.05
Cux1P53564 Gm24855-201ENSMUST00000104848 97 ntBASIC8.49□□□□□ -1.05
Cux1P53564 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Cux1P53564 Gm6620-201ENSMUST00000120113 715 ntBASIC8.49□□□□□ -1.05
Cux1P53564 Gm3242-201ENSMUST00000171273 485 ntBASIC8.49□□□□□ -1.05
Cux1P53564 Gm19029-201ENSMUST00000189923 564 ntBASIC8.49□□□□□ -1.05
Cux1P53564 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cux1P53564 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC8.49□□□□□ -1.05
Cux1P53564 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Cux1P53564 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Cux1P53564 Gm23508-201ENSMUST00000083079 72 ntBASIC8.49□□□□□ -1.05
Cux1P53564 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cux1P53564 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Cux1P53564 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cux1P53564 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Cux1P53564 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cux1P53564 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Cux1P53564 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Cux1P53564 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cux1P53564 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC8.48□□□□□ -1.05
Cux1P53564 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC8.48□□□□□ -1.05
Cux1P53564 AC153505.2-201ENSMUST00000217741 277 ntBASIC8.48□□□□□ -1.05
Cux1P53564 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Cux1P53564 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Cux1P53564 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Cux1P53564 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Cux1P53564 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cux1P53564 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cux1P53564 Gm43750-201ENSMUST00000199027 2493 ntBASIC8.47□□□□□ -1.05
Cux1P53564 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Cux1P53564 Gm38198-201ENSMUST00000191772 3581 ntBASIC8.47□□□□□ -1.05
Cux1P53564 Gm38062-201ENSMUST00000192541 1856 ntBASIC8.47□□□□□ -1.05
Cux1P53564 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC8.47□□□□□ -1.05
Cux1P53564 Gm13033-201ENSMUST00000117591 1057 ntBASIC8.47□□□□□ -1.05
Cux1P53564 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cux1P53564 Gm22870-201ENSMUST00000157501 112 ntBASIC8.47□□□□□ -1.05
Cux1P53564 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cux1P53564 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC8.47□□□□□ -1.05
Cux1P53564 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC8.47□□□□□ -1.05
Cux1P53564 Igkv12-47-201ENSMUST00000196961 356 ntBASIC8.47□□□□□ -1.05
Cux1P53564 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Cux1P53564 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC8.47□□□□□ -1.05
Cux1P53564 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Cux1P53564 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Cux1P53564 Olfr878-201ENSMUST00000086061 1065 ntBASIC8.47□□□□□ -1.05
Cux1P53564 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cux1P53564 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cux1P53564 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Cux1P53564 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
Cux1P53564 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cux1P53564 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Cux1P53564 Gm37051-201ENSMUST00000194535 2943 ntBASIC8.47□□□□□ -1.05
Cux1P53564 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cux1P53564 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Cux1P53564 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cux1P53564 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Cux1P53564 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Cux1P53564 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms