Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Mir8100-201ENSMUST00000184230 121 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Mir6363-201ENSMUST00000184880 114 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm29336-201ENSMUST00000186042 573 ntTSL 2 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm18849-201ENSMUST00000189861 560 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm2229-201ENSMUST00000193328 710 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm5002-201ENSMUST00000207145 223 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm8745-201ENSMUST00000207846 782 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC8.69□□□□□ -1.02
Trim35Q8C006 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC8.69□□□□□ -1.02
Trim35Q8C006 AC129202.3-201ENSMUST00000224413 733 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 AC098719.1-201ENSMUST00000228920 371 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Olfr1371-201ENSMUST00000075844 936 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Tyrp1-202ENSMUST00000102831 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm37198-201ENSMUST00000195593 2110 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 AC156025.3-201ENSMUST00000225919 3095 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm43839-201ENSMUST00000196183 2325 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC8.69□□□□□ -1.02
Trim35Q8C006 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim35Q8C006 Gm42572-201ENSMUST00000202292 3378 ntBASIC8.69□□□□□ -1.02
Trim35Q8C006 Casc1-201ENSMUST00000060797 2572 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm18796-201ENSMUST00000190440 1767 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 Kprp-201ENSMUST00000072363 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm15931-201ENSMUST00000118066 1852 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm9436-201ENSMUST00000120949 1855 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 Eif3l-201ENSMUST00000040518 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 9330121K16Rik-201ENSMUST00000211464 3886 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Trim35Q8C006 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm43414-201ENSMUST00000197710 3188 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 Gpr85-203ENSMUST00000115492 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Serpina3f-202ENSMUST00000121337 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm37132-201ENSMUST00000195553 2238 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 C8b-201ENSMUST00000031663 2239 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Siglech-202ENSMUST00000094360 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Lgals8-207ENSMUST00000143693 2457 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm35934-201ENSMUST00000213002 2494 ntTSL 5 BASIC8.68□□□□□ -1.02
Trim35Q8C006 Zscan18-205ENSMUST00000211392 3709 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm45629-201ENSMUST00000209629 2546 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 Cyp2d37-ps-201ENSMUST00000100380 590 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Trim35Q8C006 Hspa12b-202ENSMUST00000100763 628 ntTSL 2 BASIC8.68□□□□□ -1.02
Trim35Q8C006 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Trim35Q8C006 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm14287-201ENSMUST00000121060 117 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm17152-201ENSMUST00000172430 535 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm22649-201ENSMUST00000175134 298 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm10591-201ENSMUST00000178168 402 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Ccl21b-202ENSMUST00000178864 402 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm9637-201ENSMUST00000179141 873 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 Sbp-207ENSMUST00000183252 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Mir6336-201ENSMUST00000183581 130 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm12117-201ENSMUST00000183831 456 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm20111-201ENSMUST00000184830 319 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 Ighv1-13-202ENSMUST00000195668 350 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC8.68□□□□□ -1.02
Trim35Q8C006 B230311B06Rik-202ENSMUST00000207610 687 ntTSL 3 BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm2059-201ENSMUST00000212025 287 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm5373-201ENSMUST00000212113 1050 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 AC124184.1-201ENSMUST00000218167 283 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm21056-202ENSMUST00000223122 423 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 AC115291.2-201ENSMUST00000228335 437 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 Tcl1b1-201ENSMUST00000085043 1040 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Fanci-202ENSMUST00000118959 1301 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 I830134H01Rik-202ENSMUST00000181592 2755 ntBASIC8.68□□□□□ -1.02
Trim35Q8C006 Slc25a14-202ENSMUST00000114936 1582 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
Trim35Q8C006 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Enox2-203ENSMUST00000114912 3167 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Ftsj1-203ENSMUST00000115595 1656 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Polr2l-201ENSMUST00000043870 1650 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Zwint-201ENSMUST00000020081 1834 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Trim35Q8C006 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms