Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.71□□□□□ -1.33
Col4a1P02463 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC6.71□□□□□ -1.33
Col4a1P02463 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC6.71□□□□□ -1.33
Col4a1P02463 Gm45156-201ENSMUST00000207255 439 ntBASIC6.71□□□□□ -1.33
Col4a1P02463 Gm18205-201ENSMUST00000209215 841 ntBASIC6.71□□□□□ -1.33
Col4a1P02463 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC6.71□□□□□ -1.33
Col4a1P02463 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.71□□□□□ -1.33
Col4a1P02463 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Col4a1P02463 Gm43567-201ENSMUST00000197581 1978 ntBASIC6.71□□□□□ -1.33
Col4a1P02463 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Col4a1P02463 Gm44801-201ENSMUST00000207644 2060 ntBASIC6.71□□□□□ -1.33
Col4a1P02463 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col4a1P02463 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC6.71□□□□□ -1.34
Col4a1P02463 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Col4a1P02463 Gm10652-201ENSMUST00000199790 2622 ntBASIC6.71□□□□□ -1.34
Col4a1P02463 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col4a1P02463 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col4a1P02463 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col4a1P02463 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col4a1P02463 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col4a1P02463 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.71□□□□□ -1.34
Col4a1P02463 Gm44439-201ENSMUST00000203379 3592 ntBASIC6.71□□□□□ -1.34
Col4a1P02463 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col4a1P02463 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC6.71□□□□□ -1.34
Col4a1P02463 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col4a1P02463 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.71□□□□□ -1.34
Col4a1P02463 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Col4a1P02463 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.71□□□□□ -1.34
Col4a1P02463 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col4a1P02463 Gm11909-201ENSMUST00000121424 759 ntBASIC6.71□□□□□ -1.34
Col4a1P02463 Gm12422-201ENSMUST00000121431 302 ntBASIC6.71□□□□□ -1.34
Col4a1P02463 Gm22870-201ENSMUST00000157501 112 ntBASIC6.71□□□□□ -1.34
Col4a1P02463 Gm10784-201ENSMUST00000178715 238 ntBASIC6.71□□□□□ -1.34
Col4a1P02463 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col4a1P02463 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC6.71□□□□□ -1.34
Col4a1P02463 Mir7031-201ENSMUST00000183860 65 ntBASIC6.71□□□□□ -1.34
Col4a1P02463 Gm40598-201ENSMUST00000222953 547 ntBASIC6.71□□□□□ -1.34
Col4a1P02463 AC152169.2-201ENSMUST00000224558 613 ntBASIC6.71□□□□□ -1.34
Col4a1P02463 AC096628.1-201ENSMUST00000226060 641 ntBASIC6.71□□□□□ -1.34
Col4a1P02463 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Col4a1P02463 Snord15b-201ENSMUST00000083032 145 ntBASIC6.71□□□□□ -1.34
Col4a1P02463 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.71□□□□□ -1.34
Col4a1P02463 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC6.7□□□□□ -1.34
Col4a1P02463 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col4a1P02463 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC6.7□□□□□ -1.34
Col4a1P02463 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.7□□□□□ -1.34
Col4a1P02463 Gm43488-201ENSMUST00000198874 2504 ntBASIC6.7□□□□□ -1.34
Col4a1P02463 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col4a1P02463 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col4a1P02463 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Col4a1P02463 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.7□□□□□ -1.34
Col4a1P02463 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col4a1P02463 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col4a1P02463 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col4a1P02463 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col4a1P02463 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col4a1P02463 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col4a1P02463 Mir92b-201ENSMUST00000102300 83 ntBASIC6.7□□□□□ -1.34
Col4a1P02463 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col4a1P02463 Gm25418-201ENSMUST00000104214 129 ntBASIC6.7□□□□□ -1.34
Col4a1P02463 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Col4a1P02463 Gm13033-201ENSMUST00000117591 1057 ntBASIC6.7□□□□□ -1.34
Col4a1P02463 Gm13367-201ENSMUST00000119955 796 ntBASIC6.7□□□□□ -1.34
Col4a1P02463 Gm13363-201ENSMUST00000122008 522 ntBASIC6.7□□□□□ -1.34
Col4a1P02463 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.7□□□□□ -1.34
Col4a1P02463 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC6.7□□□□□ -1.34
Col4a1P02463 Gm3148-201ENSMUST00000203594 612 ntBASIC6.7□□□□□ -1.34
Col4a1P02463 Gm45228-201ENSMUST00000206585 352 ntBASIC6.7□□□□□ -1.34
Col4a1P02463 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC6.7□□□□□ -1.34
Col4a1P02463 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC6.7□□□□□ -1.34
Col4a1P02463 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.7□□□□□ -1.34
Col4a1P02463 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
Col4a1P02463 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col4a1P02463 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Col4a1P02463 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.7□□□□□ -1.34
Col4a1P02463 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col4a1P02463 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col4a1P02463 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col4a1P02463 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col4a1P02463 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col4a1P02463 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col4a1P02463 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col4a1P02463 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col4a1P02463 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a1P02463 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Col4a1P02463 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col4a1P02463 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col4a1P02463 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a1P02463 Gm11561-201ENSMUST00000117429 417 ntBASIC6.69□□□□□ -1.34
Col4a1P02463 Gm13213-201ENSMUST00000119668 474 ntBASIC6.69□□□□□ -1.34
Col4a1P02463 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.69□□□□□ -1.34
Col4a1P02463 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC6.69□□□□□ -1.34
Col4a1P02463 Gm20674-201ENSMUST00000177452 369 ntBASIC6.69□□□□□ -1.34
Col4a1P02463 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.69□□□□□ -1.34
Col4a1P02463 Gm34176-201ENSMUST00000192621 474 ntBASIC6.69□□□□□ -1.34
Col4a1P02463 Gm18127-201ENSMUST00000208479 725 ntBASIC6.69□□□□□ -1.34
Col4a1P02463 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Col4a1P02463 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Col4a1P02463 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Col4a1P02463 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms