Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RpgrQ9R0X5 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RpgrQ9R0X5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
RpgrQ9R0X5 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.14■□□□□ 0.49
RpgrQ9R0X5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RpgrQ9R0X5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RpgrQ9R0X5 Nespas-201ENSMUST00000143738 1083 ntBASIC18.14■□□□□ 0.49
RpgrQ9R0X5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.14■□□□□ 0.49
RpgrQ9R0X5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.14■□□□□ 0.49
RpgrQ9R0X5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.14■□□□□ 0.49
RpgrQ9R0X5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RpgrQ9R0X5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RpgrQ9R0X5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RpgrQ9R0X5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RpgrQ9R0X5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RpgrQ9R0X5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.13■□□□□ 0.49
RpgrQ9R0X5 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RpgrQ9R0X5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RpgrQ9R0X5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RpgrQ9R0X5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RpgrQ9R0X5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RpgrQ9R0X5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RpgrQ9R0X5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.12■□□□□ 0.49
RpgrQ9R0X5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RpgrQ9R0X5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.12■□□□□ 0.49
RpgrQ9R0X5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RpgrQ9R0X5 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.12■□□□□ 0.49
RpgrQ9R0X5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RpgrQ9R0X5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RpgrQ9R0X5 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RpgrQ9R0X5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.12■□□□□ 0.49
RpgrQ9R0X5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RpgrQ9R0X5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
RpgrQ9R0X5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.1■□□□□ 0.49
RpgrQ9R0X5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RpgrQ9R0X5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RpgrQ9R0X5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RpgrQ9R0X5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RpgrQ9R0X5 Gm6365-201ENSMUST00000054711 744 ntBASIC18.1■□□□□ 0.49
RpgrQ9R0X5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RpgrQ9R0X5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RpgrQ9R0X5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RpgrQ9R0X5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.09■□□□□ 0.49
RpgrQ9R0X5 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RpgrQ9R0X5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RpgrQ9R0X5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RpgrQ9R0X5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RpgrQ9R0X5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RpgrQ9R0X5 Mir5133-201ENSMUST00000174955 77 ntBASIC18.09■□□□□ 0.49
RpgrQ9R0X5 Gm37179-201ENSMUST00000194862 823 ntBASIC18.09■□□□□ 0.49
RpgrQ9R0X5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RpgrQ9R0X5 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RpgrQ9R0X5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RpgrQ9R0X5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RpgrQ9R0X5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RpgrQ9R0X5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RpgrQ9R0X5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RpgrQ9R0X5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms