Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.86■□□□□ 0.45
Snrnp48Q9D361 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Snrnp48Q9D361 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Snrnp48Q9D361 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Snrnp48Q9D361 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Snrnp48Q9D361 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.85■□□□□ 0.45
Snrnp48Q9D361 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Snrnp48Q9D361 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Snrnp48Q9D361 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Snrnp48Q9D361 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.85■□□□□ 0.45
Snrnp48Q9D361 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.85■□□□□ 0.45
Snrnp48Q9D361 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Snrnp48Q9D361 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.85■□□□□ 0.45
Snrnp48Q9D361 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Snrnp48Q9D361 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Snrnp48Q9D361 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Snrnp48Q9D361 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Snrnp48Q9D361 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Snrnp48Q9D361 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Snrnp48Q9D361 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
Snrnp48Q9D361 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Snrnp48Q9D361 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Snrnp48Q9D361 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Snrnp48Q9D361 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Snrnp48Q9D361 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Snrnp48Q9D361 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Snrnp48Q9D361 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Snrnp48Q9D361 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Snrnp48Q9D361 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Snrnp48Q9D361 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Snrnp48Q9D361 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Snrnp48Q9D361 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Snrnp48Q9D361 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Snrnp48Q9D361 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Snrnp48Q9D361 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Snrnp48Q9D361 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Snrnp48Q9D361 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Snrnp48Q9D361 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Snrnp48Q9D361 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Snrnp48Q9D361 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Snrnp48Q9D361 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.83■□□□□ 0.44
Snrnp48Q9D361 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Snrnp48Q9D361 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Snrnp48Q9D361 Gm20049-201ENSMUST00000219950 730 ntBASIC17.83■□□□□ 0.44
Snrnp48Q9D361 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Snrnp48Q9D361 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Snrnp48Q9D361 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Snrnp48Q9D361 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.83■□□□□ 0.44
Snrnp48Q9D361 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Gm12896-201ENSMUST00000118430 226 ntBASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Snrnp48Q9D361 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Snrnp48Q9D361 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Snrnp48Q9D361 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Snrnp48Q9D361 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Snrnp48Q9D361 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Snrnp48Q9D361 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.81■□□□□ 0.44
Snrnp48Q9D361 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.81■□□□□ 0.44
Snrnp48Q9D361 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Snrnp48Q9D361 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Snrnp48Q9D361 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Snrnp48Q9D361 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Snrnp48Q9D361 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Snrnp48Q9D361 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Snrnp48Q9D361 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Snrnp48Q9D361 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Snrnp48Q9D361 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Snrnp48Q9D361 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Snrnp48Q9D361 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Snrnp48Q9D361 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Snrnp48Q9D361 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.8■□□□□ 0.44
Snrnp48Q9D361 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.8■□□□□ 0.44
Snrnp48Q9D361 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Snrnp48Q9D361 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Snrnp48Q9D361 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Snrnp48Q9D361 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Snrnp48Q9D361 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Snrnp48Q9D361 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Snrnp48Q9D361 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Snrnp48Q9D361 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Snrnp48Q9D361 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Snrnp48Q9D361 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Snrnp48Q9D361 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Snrnp48Q9D361 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms