Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ssr1Q9CY50 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssr1Q9CY50 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.35■□□□□ 0.69
Ssr1Q9CY50 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssr1Q9CY50 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ssr1Q9CY50 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssr1Q9CY50 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ssr1Q9CY50 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ssr1Q9CY50 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssr1Q9CY50 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssr1Q9CY50 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssr1Q9CY50 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssr1Q9CY50 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssr1Q9CY50 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssr1Q9CY50 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ssr1Q9CY50 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Ssr1Q9CY50 Nespas-201ENSMUST00000143738 1083 ntBASIC19.34■□□□□ 0.69
Ssr1Q9CY50 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.34■□□□□ 0.69
Ssr1Q9CY50 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssr1Q9CY50 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssr1Q9CY50 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssr1Q9CY50 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.33■□□□□ 0.69
Ssr1Q9CY50 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ssr1Q9CY50 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ssr1Q9CY50 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ssr1Q9CY50 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ssr1Q9CY50 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Ssr1Q9CY50 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.33■□□□□ 0.68
Ssr1Q9CY50 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Ssr1Q9CY50 Gm6420-201ENSMUST00000193885 723 ntBASIC19.33■□□□□ 0.68
Ssr1Q9CY50 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.33■□□□□ 0.68
Ssr1Q9CY50 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.33■□□□□ 0.68
Ssr1Q9CY50 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ssr1Q9CY50 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ssr1Q9CY50 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Ssr1Q9CY50 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Ssr1Q9CY50 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ssr1Q9CY50 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.33■□□□□ 0.68
Ssr1Q9CY50 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ssr1Q9CY50 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ssr1Q9CY50 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Ssr1Q9CY50 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ssr1Q9CY50 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ssr1Q9CY50 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.32■□□□□ 0.68
Ssr1Q9CY50 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Ssr1Q9CY50 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ssr1Q9CY50 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.32■□□□□ 0.68
Ssr1Q9CY50 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.32■□□□□ 0.68
Ssr1Q9CY50 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.32■□□□□ 0.68
Ssr1Q9CY50 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ssr1Q9CY50 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ssr1Q9CY50 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ssr1Q9CY50 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ssr1Q9CY50 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ssr1Q9CY50 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ssr1Q9CY50 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssr1Q9CY50 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ssr1Q9CY50 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssr1Q9CY50 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssr1Q9CY50 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ssr1Q9CY50 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ssr1Q9CY50 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssr1Q9CY50 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ssr1Q9CY50 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ssr1Q9CY50 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssr1Q9CY50 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssr1Q9CY50 Gm18671-201ENSMUST00000214826 683 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms