Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trim8Q99PJ2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim8Q99PJ2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim8Q99PJ2 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.52■□□□□ 0.4
Trim8Q99PJ2 Gm13534-201ENSMUST00000121169 513 ntBASIC17.52■□□□□ 0.4
Trim8Q99PJ2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.52■□□□□ 0.4
Trim8Q99PJ2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Trim8Q99PJ2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim8Q99PJ2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim8Q99PJ2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim8Q99PJ2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Trim8Q99PJ2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim8Q99PJ2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim8Q99PJ2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trim8Q99PJ2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim8Q99PJ2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Trim8Q99PJ2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim8Q99PJ2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim8Q99PJ2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim8Q99PJ2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim8Q99PJ2 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.51■□□□□ 0.39
Trim8Q99PJ2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.51■□□□□ 0.39
Trim8Q99PJ2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim8Q99PJ2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim8Q99PJ2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim8Q99PJ2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim8Q99PJ2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim8Q99PJ2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim8Q99PJ2 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.51■□□□□ 0.39
Trim8Q99PJ2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim8Q99PJ2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim8Q99PJ2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim8Q99PJ2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Gm18284-201ENSMUST00000172604 624 ntBASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim8Q99PJ2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim8Q99PJ2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Gm8495-201ENSMUST00000188740 694 ntBASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim8Q99PJ2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim8Q99PJ2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim8Q99PJ2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim8Q99PJ2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.47■□□□□ 0.39
Trim8Q99PJ2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim8Q99PJ2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim8Q99PJ2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms