Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf111Q99ML9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.34■□□□□ 0.37
Rnf111Q99ML9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.34■□□□□ 0.37
Rnf111Q99ML9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf111Q99ML9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rnf111Q99ML9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf111Q99ML9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf111Q99ML9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf111Q99ML9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rnf111Q99ML9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rnf111Q99ML9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf111Q99ML9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf111Q99ML9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf111Q99ML9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf111Q99ML9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf111Q99ML9 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.33■□□□□ 0.36
Rnf111Q99ML9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Rnf111Q99ML9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf111Q99ML9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf111Q99ML9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Rnf111Q99ML9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf111Q99ML9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf111Q99ML9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf111Q99ML9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Gm29257-201ENSMUST00000186115 639 ntBASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf111Q99ML9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf111Q99ML9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rnf111Q99ML9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.3■□□□□ 0.36
Rnf111Q99ML9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf111Q99ML9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf111Q99ML9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf111Q99ML9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Rnf111Q99ML9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.3■□□□□ 0.36
Rnf111Q99ML9 Gm7291-201ENSMUST00000199147 382 ntBASIC17.3■□□□□ 0.36
Rnf111Q99ML9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.3■□□□□ 0.36
Rnf111Q99ML9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.3■□□□□ 0.36
Rnf111Q99ML9 Tgds-204ENSMUST00000228543 1594 ntBASIC17.3■□□□□ 0.36
Rnf111Q99ML9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf111Q99ML9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf111Q99ML9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rnf111Q99ML9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf111Q99ML9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf111Q99ML9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf111Q99ML9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf111Q99ML9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf111Q99ML9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.29■□□□□ 0.36
Rnf111Q99ML9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf111Q99ML9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf111Q99ML9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf111Q99ML9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Rnf111Q99ML9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf111Q99ML9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf111Q99ML9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rnf111Q99ML9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rnf111Q99ML9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms