Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.83■□□□□ 0.61
Usp11Q99K46 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Usp11Q99K46 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.83■□□□□ 0.6
Usp11Q99K46 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp11Q99K46 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp11Q99K46 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp11Q99K46 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp11Q99K46 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp11Q99K46 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp11Q99K46 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Usp11Q99K46 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp11Q99K46 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Usp11Q99K46 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp11Q99K46 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp11Q99K46 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp11Q99K46 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp11Q99K46 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp11Q99K46 Gm13148-201ENSMUST00000118892 745 ntBASIC18.82■□□□□ 0.6
Usp11Q99K46 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.82■□□□□ 0.6
Usp11Q99K46 Gm6211-202ENSMUST00000167849 925 ntBASIC18.82■□□□□ 0.6
Usp11Q99K46 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp11Q99K46 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Usp11Q99K46 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp11Q99K46 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp11Q99K46 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp11Q99K46 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp11Q99K46 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp11Q99K46 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp11Q99K46 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp11Q99K46 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp11Q99K46 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp11Q99K46 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp11Q99K46 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp11Q99K46 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp11Q99K46 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp11Q99K46 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp11Q99K46 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp11Q99K46 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp11Q99K46 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp11Q99K46 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp11Q99K46 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp11Q99K46 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp11Q99K46 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp11Q99K46 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp11Q99K46 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Usp11Q99K46 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Usp11Q99K46 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp11Q99K46 Gm29257-201ENSMUST00000186115 639 ntBASIC18.8■□□□□ 0.6
Usp11Q99K46 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.8■□□□□ 0.6
Usp11Q99K46 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.8■□□□□ 0.6
Usp11Q99K46 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.8■□□□□ 0.6
Usp11Q99K46 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.8■□□□□ 0.6
Usp11Q99K46 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp11Q99K46 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp11Q99K46 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp11Q99K46 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp11Q99K46 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp11Q99K46 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp11Q99K46 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp11Q99K46 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Usp11Q99K46 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp11Q99K46 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp11Q99K46 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp11Q99K46 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp11Q99K46 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Usp11Q99K46 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp11Q99K46 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Usp11Q99K46 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp11Q99K46 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp11Q99K46 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Usp11Q99K46 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp11Q99K46 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Usp11Q99K46 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Usp11Q99K46 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.78■□□□□ 0.6
Usp11Q99K46 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.78■□□□□ 0.6
Usp11Q99K46 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp11Q99K46 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp11Q99K46 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp11Q99K46 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp11Q99K46 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp11Q99K46 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp11Q99K46 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.78■□□□□ 0.6
Usp11Q99K46 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp11Q99K46 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp11Q99K46 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp11Q99K46 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp11Q99K46 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Usp11Q99K46 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Usp11Q99K46 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Usp11Q99K46 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp11Q99K46 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Usp11Q99K46 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp11Q99K46 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Usp11Q99K46 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp11Q99K46 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp11Q99K46 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Usp11Q99K46 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp11Q99K46 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Usp11Q99K46 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Usp11Q99K46 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms