Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhac1Q91Y10 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhac1Q91Y10 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhac1Q91Y10 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhac1Q91Y10 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhac1Q91Y10 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdhac1Q91Y10 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhac1Q91Y10 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhac1Q91Y10 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhac1Q91Y10 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
Pcdhac1Q91Y10 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhac1Q91Y10 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhac1Q91Y10 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhac1Q91Y10 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Gm6420-201ENSMUST00000193885 723 ntBASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhac1Q91Y10 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhac1Q91Y10 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.67■□□□□ 0.26
Pcdhac1Q91Y10 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms