Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cuedc1Q8R3V6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cuedc1Q8R3V6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cuedc1Q8R3V6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cuedc1Q8R3V6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cuedc1Q8R3V6 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.21■□□□□ 0.19
Cuedc1Q8R3V6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cuedc1Q8R3V6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cuedc1Q8R3V6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cuedc1Q8R3V6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cuedc1Q8R3V6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cuedc1Q8R3V6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Cuedc1Q8R3V6 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.2■□□□□ 0.18
Cuedc1Q8R3V6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cuedc1Q8R3V6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cuedc1Q8R3V6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cuedc1Q8R3V6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cuedc1Q8R3V6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cuedc1Q8R3V6 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.2■□□□□ 0.18
Cuedc1Q8R3V6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.2■□□□□ 0.18
Cuedc1Q8R3V6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cuedc1Q8R3V6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cuedc1Q8R3V6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cuedc1Q8R3V6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cuedc1Q8R3V6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cuedc1Q8R3V6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cuedc1Q8R3V6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.2■□□□□ 0.18
Cuedc1Q8R3V6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cuedc1Q8R3V6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cuedc1Q8R3V6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cuedc1Q8R3V6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cuedc1Q8R3V6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cuedc1Q8R3V6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.17■□□□□ 0.18
Cuedc1Q8R3V6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cuedc1Q8R3V6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cuedc1Q8R3V6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cuedc1Q8R3V6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cuedc1Q8R3V6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cuedc1Q8R3V6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cuedc1Q8R3V6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cuedc1Q8R3V6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cuedc1Q8R3V6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cuedc1Q8R3V6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cuedc1Q8R3V6 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.17■□□□□ 0.18
Cuedc1Q8R3V6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cuedc1Q8R3V6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.17■□□□□ 0.18
Cuedc1Q8R3V6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cuedc1Q8R3V6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cuedc1Q8R3V6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cuedc1Q8R3V6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cuedc1Q8R3V6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cuedc1Q8R3V6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cuedc1Q8R3V6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cuedc1Q8R3V6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cuedc1Q8R3V6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.16■□□□□ 0.18
Cuedc1Q8R3V6 Gm5417-201ENSMUST00000079706 384 ntBASIC16.16■□□□□ 0.18
Cuedc1Q8R3V6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cuedc1Q8R3V6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms