Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smco1Q8CEZ1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smco1Q8CEZ1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.33■□□□□ 0.21
Smco1Q8CEZ1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smco1Q8CEZ1 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.33■□□□□ 0.21
Smco1Q8CEZ1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.33■□□□□ 0.21
Smco1Q8CEZ1 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.33■□□□□ 0.21
Smco1Q8CEZ1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.33■□□□□ 0.21
Smco1Q8CEZ1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Smco1Q8CEZ1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smco1Q8CEZ1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smco1Q8CEZ1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Smco1Q8CEZ1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smco1Q8CEZ1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smco1Q8CEZ1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smco1Q8CEZ1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smco1Q8CEZ1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smco1Q8CEZ1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Smco1Q8CEZ1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smco1Q8CEZ1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smco1Q8CEZ1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Smco1Q8CEZ1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smco1Q8CEZ1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smco1Q8CEZ1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smco1Q8CEZ1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smco1Q8CEZ1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smco1Q8CEZ1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smco1Q8CEZ1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smco1Q8CEZ1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smco1Q8CEZ1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Smco1Q8CEZ1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smco1Q8CEZ1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smco1Q8CEZ1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smco1Q8CEZ1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Smco1Q8CEZ1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smco1Q8CEZ1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smco1Q8CEZ1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Smco1Q8CEZ1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smco1Q8CEZ1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smco1Q8CEZ1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Smco1Q8CEZ1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smco1Q8CEZ1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smco1Q8CEZ1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Smco1Q8CEZ1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smco1Q8CEZ1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smco1Q8CEZ1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smco1Q8CEZ1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Smco1Q8CEZ1 Gm22238-201ENSMUST00000175222 88 ntBASIC16.29■□□□□ 0.2
Smco1Q8CEZ1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smco1Q8CEZ1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smco1Q8CEZ1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smco1Q8CEZ1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smco1Q8CEZ1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Smco1Q8CEZ1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smco1Q8CEZ1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smco1Q8CEZ1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smco1Q8CEZ1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.28■□□□□ 0.2
Smco1Q8CEZ1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smco1Q8CEZ1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Smco1Q8CEZ1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms