Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim35Q8C006 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim35Q8C006 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim35Q8C006 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim35Q8C006 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim35Q8C006 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim35Q8C006 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trim35Q8C006 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim35Q8C006 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim35Q8C006 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim35Q8C006 BC021767-201ENSMUST00000126387 1716 ntBASIC18.36■□□□□ 0.53
Trim35Q8C006 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim35Q8C006 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC18.36■□□□□ 0.53
Trim35Q8C006 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim35Q8C006 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim35Q8C006 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim35Q8C006 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim35Q8C006 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trim35Q8C006 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.36■□□□□ 0.53
Trim35Q8C006 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC18.36■□□□□ 0.53
Trim35Q8C006 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim35Q8C006 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim35Q8C006 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim35Q8C006 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim35Q8C006 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim35Q8C006 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim35Q8C006 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim35Q8C006 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim35Q8C006 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim35Q8C006 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim35Q8C006 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim35Q8C006 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim35Q8C006 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim35Q8C006 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim35Q8C006 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
Trim35Q8C006 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim35Q8C006 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim35Q8C006 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim35Q8C006 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim35Q8C006 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim35Q8C006 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim35Q8C006 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.35■□□□□ 0.53
Trim35Q8C006 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim35Q8C006 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trim35Q8C006 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.35■□□□□ 0.53
Trim35Q8C006 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC18.35■□□□□ 0.53
Trim35Q8C006 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim35Q8C006 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Trim35Q8C006 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim35Q8C006 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim35Q8C006 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim35Q8C006 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim35Q8C006 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim35Q8C006 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim35Q8C006 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim35Q8C006 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim35Q8C006 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim35Q8C006 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim35Q8C006 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim35Q8C006 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim35Q8C006 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim35Q8C006 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim35Q8C006 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim35Q8C006 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim35Q8C006 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trim35Q8C006 Gm13333-201ENSMUST00000119424 781 ntBASIC18.34■□□□□ 0.53
Trim35Q8C006 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim35Q8C006 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim35Q8C006 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim35Q8C006 Gm38018-201ENSMUST00000195651 540 ntBASIC18.34■□□□□ 0.53
Trim35Q8C006 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.34■□□□□ 0.53
Trim35Q8C006 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim35Q8C006 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim35Q8C006 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim35Q8C006 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim35Q8C006 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim35Q8C006 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim35Q8C006 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim35Q8C006 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim35Q8C006 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim35Q8C006 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Trim35Q8C006 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.33■□□□□ 0.52
Trim35Q8C006 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim35Q8C006 Gm37709-201ENSMUST00000195074 600 ntBASIC18.33■□□□□ 0.52
Trim35Q8C006 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim35Q8C006 Gm10602-201ENSMUST00000098239 609 ntBASIC18.33■□□□□ 0.52
Trim35Q8C006 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.33■□□□□ 0.52
Trim35Q8C006 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.33■□□□□ 0.52
Trim35Q8C006 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim35Q8C006 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trim35Q8C006 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim35Q8C006 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trim35Q8C006 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim35Q8C006 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim35Q8C006 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim35Q8C006 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim35Q8C006 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Trim35Q8C006 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim35Q8C006 Gm28359-201ENSMUST00000187470 1322 ntBASIC18.32■□□□□ 0.52
Trim35Q8C006 Gm7290-201ENSMUST00000104990 617 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms