Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smndc1Q8BGT7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Smndc1Q8BGT7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smndc1Q8BGT7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smndc1Q8BGT7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Smndc1Q8BGT7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smndc1Q8BGT7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smndc1Q8BGT7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.33■□□□□ 0.36
Smndc1Q8BGT7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smndc1Q8BGT7 Gm10493-201ENSMUST00000097270 612 ntBASIC17.33■□□□□ 0.36
Smndc1Q8BGT7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smndc1Q8BGT7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Smndc1Q8BGT7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.32■□□□□ 0.36
Smndc1Q8BGT7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Smndc1Q8BGT7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smndc1Q8BGT7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smndc1Q8BGT7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smndc1Q8BGT7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.32■□□□□ 0.36
Smndc1Q8BGT7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smndc1Q8BGT7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smndc1Q8BGT7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smndc1Q8BGT7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smndc1Q8BGT7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smndc1Q8BGT7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smndc1Q8BGT7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Smndc1Q8BGT7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smndc1Q8BGT7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smndc1Q8BGT7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smndc1Q8BGT7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smndc1Q8BGT7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smndc1Q8BGT7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smndc1Q8BGT7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smndc1Q8BGT7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smndc1Q8BGT7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.31■□□□□ 0.36
Smndc1Q8BGT7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smndc1Q8BGT7 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.31■□□□□ 0.36
Smndc1Q8BGT7 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.31■□□□□ 0.36
Smndc1Q8BGT7 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.31■□□□□ 0.36
Smndc1Q8BGT7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
Smndc1Q8BGT7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smndc1Q8BGT7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Smndc1Q8BGT7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.31■□□□□ 0.36
Smndc1Q8BGT7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smndc1Q8BGT7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smndc1Q8BGT7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Smndc1Q8BGT7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smndc1Q8BGT7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smndc1Q8BGT7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smndc1Q8BGT7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smndc1Q8BGT7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.29■□□□□ 0.36
Smndc1Q8BGT7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
Smndc1Q8BGT7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.29■□□□□ 0.36
Smndc1Q8BGT7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smndc1Q8BGT7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smndc1Q8BGT7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smndc1Q8BGT7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smndc1Q8BGT7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smndc1Q8BGT7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smndc1Q8BGT7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smndc1Q8BGT7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms