Protein–RNA interactions for Protein: Q6NS45

Ccdc66, Coiled-coil domain-containing protein 66, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc66Q6NS45 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc66Q6NS45 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc66Q6NS45 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc66Q6NS45 Idnk-204ENSMUST00000226010 1898 ntBASIC20.67■□□□□ 0.9
Ccdc66Q6NS45 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Ccdc66Q6NS45 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Ccdc66Q6NS45 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc66Q6NS45 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ccdc66Q6NS45 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc66Q6NS45 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc66Q6NS45 Gm5874-201ENSMUST00000096101 508 ntBASIC20.67■□□□□ 0.9
Ccdc66Q6NS45 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc66Q6NS45 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc66Q6NS45 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.67■□□□□ 0.9
Ccdc66Q6NS45 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc66Q6NS45 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc66Q6NS45 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc66Q6NS45 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc66Q6NS45 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 AV356131-201ENSMUST00000206201 750 ntBASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc66Q6NS45 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc66Q6NS45 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc66Q6NS45 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc66Q6NS45 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc66Q6NS45 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc66Q6NS45 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.65■□□□□ 0.9
Ccdc66Q6NS45 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc66Q6NS45 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc66Q6NS45 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc66Q6NS45 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.65■□□□□ 0.9
Ccdc66Q6NS45 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc66Q6NS45 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc66Q6NS45 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc66Q6NS45 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc66Q6NS45 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc66Q6NS45 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc66Q6NS45 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc66Q6NS45 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc66Q6NS45 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc66Q6NS45 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc66Q6NS45 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc66Q6NS45 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc66Q6NS45 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc66Q6NS45 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc66Q6NS45 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc66Q6NS45 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.64■□□□□ 0.89
Ccdc66Q6NS45 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc66Q6NS45 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc66Q6NS45 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc66Q6NS45 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.63■□□□□ 0.89
Ccdc66Q6NS45 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc66Q6NS45 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc66Q6NS45 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ccdc66Q6NS45 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ccdc66Q6NS45 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc66Q6NS45 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc66Q6NS45 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc66Q6NS45 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms