Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Traf4Q61382 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Traf4Q61382 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.8■□□□□ 0.12
Traf4Q61382 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Traf4Q61382 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Traf4Q61382 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.8■□□□□ 0.12
Traf4Q61382 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.8■□□□□ 0.12
Traf4Q61382 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.8■□□□□ 0.12
Traf4Q61382 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.8■□□□□ 0.12
Traf4Q61382 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.8■□□□□ 0.12
Traf4Q61382 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Traf4Q61382 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Traf4Q61382 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Traf4Q61382 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Traf4Q61382 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Traf4Q61382 Gm10252-201ENSMUST00000209541 832 ntBASIC15.79■□□□□ 0.12
Traf4Q61382 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Traf4Q61382 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Traf4Q61382 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Traf4Q61382 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.79■□□□□ 0.12
Traf4Q61382 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Traf4Q61382 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Traf4Q61382 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Gm12896-201ENSMUST00000118430 226 ntBASIC15.78■□□□□ 0.12
Traf4Q61382 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.78■□□□□ 0.12
Traf4Q61382 Gm27275-201ENSMUST00000184318 272 ntBASIC15.78■□□□□ 0.12
Traf4Q61382 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.78■□□□□ 0.12
Traf4Q61382 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Traf4Q61382 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Traf4Q61382 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Traf4Q61382 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Traf4Q61382 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Traf4Q61382 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.77■□□□□ 0.12
Traf4Q61382 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Traf4Q61382 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Traf4Q61382 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Traf4Q61382 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.77■□□□□ 0.12
Traf4Q61382 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.77■□□□□ 0.12
Traf4Q61382 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Traf4Q61382 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.77■□□□□ 0.12
Traf4Q61382 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.77■□□□□ 0.12
Traf4Q61382 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Traf4Q61382 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Traf4Q61382 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Traf4Q61382 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Traf4Q61382 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.77■□□□□ 0.11
Traf4Q61382 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Traf4Q61382 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Traf4Q61382 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Traf4Q61382 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.76■□□□□ 0.11
Traf4Q61382 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Traf4Q61382 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Traf4Q61382 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Traf4Q61382 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Traf4Q61382 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Traf4Q61382 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Traf4Q61382 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Traf4Q61382 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.76■□□□□ 0.11
Traf4Q61382 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms