Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.93□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.93□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Gm9847-201ENSMUST00000052528 599 ntBASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Gm38205-201ENSMUST00000192243 258 ntBASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15-1-dv6-1Q5R1D2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms