Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnga4Q3UW12 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Cnga4Q3UW12 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.18■□□□□ 0.5
Cnga4Q3UW12 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnga4Q3UW12 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cnga4Q3UW12 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Cnga4Q3UW12 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.18■□□□□ 0.5
Cnga4Q3UW12 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnga4Q3UW12 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnga4Q3UW12 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnga4Q3UW12 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnga4Q3UW12 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cnga4Q3UW12 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cnga4Q3UW12 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnga4Q3UW12 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.17■□□□□ 0.5
Cnga4Q3UW12 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnga4Q3UW12 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cnga4Q3UW12 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cnga4Q3UW12 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnga4Q3UW12 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnga4Q3UW12 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cnga4Q3UW12 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cnga4Q3UW12 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cnga4Q3UW12 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
Cnga4Q3UW12 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnga4Q3UW12 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnga4Q3UW12 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnga4Q3UW12 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnga4Q3UW12 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnga4Q3UW12 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cnga4Q3UW12 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnga4Q3UW12 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnga4Q3UW12 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnga4Q3UW12 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.16■□□□□ 0.5
Cnga4Q3UW12 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cnga4Q3UW12 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnga4Q3UW12 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cnga4Q3UW12 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnga4Q3UW12 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnga4Q3UW12 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.16■□□□□ 0.5
Cnga4Q3UW12 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnga4Q3UW12 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnga4Q3UW12 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnga4Q3UW12 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnga4Q3UW12 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cnga4Q3UW12 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnga4Q3UW12 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnga4Q3UW12 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Mir7075-201ENSMUST00000184187 82 ntBASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cnga4Q3UW12 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cnga4Q3UW12 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cnga4Q3UW12 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cnga4Q3UW12 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cnga4Q3UW12 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.14■□□□□ 0.49
Cnga4Q3UW12 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cnga4Q3UW12 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnga4Q3UW12 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnga4Q3UW12 Gm43173-201ENSMUST00000202246 593 ntBASIC18.14■□□□□ 0.49
Cnga4Q3UW12 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Cnga4Q3UW12 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnga4Q3UW12 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnga4Q3UW12 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cnga4Q3UW12 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cnga4Q3UW12 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.14■□□□□ 0.49
Cnga4Q3UW12 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnga4Q3UW12 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnga4Q3UW12 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnga4Q3UW12 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnga4Q3UW12 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.14■□□□□ 0.49
Cnga4Q3UW12 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnga4Q3UW12 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cnga4Q3UW12 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cnga4Q3UW12 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnga4Q3UW12 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnga4Q3UW12 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnga4Q3UW12 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnga4Q3UW12 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.13■□□□□ 0.49
Cnga4Q3UW12 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnga4Q3UW12 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms