Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.47□□□□□ -0.09
Sssca1P56873 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.47□□□□□ -0.09
Sssca1P56873 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Gm8969-201ENSMUST00000199694 526 ntBASIC14.47□□□□□ -0.09
Sssca1P56873 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.47□□□□□ -0.09
Sssca1P56873 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sssca1P56873 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sssca1P56873 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sssca1P56873 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sssca1P56873 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sssca1P56873 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sssca1P56873 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sssca1P56873 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sssca1P56873 Gm45417-201ENSMUST00000209533 758 ntBASIC14.46□□□□□ -0.09
Sssca1P56873 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.46□□□□□ -0.09
Sssca1P56873 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Sssca1P56873 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sssca1P56873 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sssca1P56873 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.45□□□□□ -0.1
Sssca1P56873 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sssca1P56873 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sssca1P56873 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sssca1P56873 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sssca1P56873 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sssca1P56873 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sssca1P56873 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.45□□□□□ -0.1
Sssca1P56873 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sssca1P56873 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sssca1P56873 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Sssca1P56873 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sssca1P56873 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.45□□□□□ -0.1
Sssca1P56873 Gm9988-201ENSMUST00000069786 435 ntBASIC14.45□□□□□ -0.1
Sssca1P56873 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.45□□□□□ -0.1
Sssca1P56873 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sssca1P56873 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sssca1P56873 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
Sssca1P56873 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sssca1P56873 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sssca1P56873 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sssca1P56873 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sssca1P56873 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sssca1P56873 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sssca1P56873 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.44□□□□□ -0.1
Sssca1P56873 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sssca1P56873 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sssca1P56873 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sssca1P56873 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sssca1P56873 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Sssca1P56873 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sssca1P56873 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sssca1P56873 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.44□□□□□ -0.1
Sssca1P56873 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sssca1P56873 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Sssca1P56873 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sssca1P56873 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sssca1P56873 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sssca1P56873 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sssca1P56873 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.44□□□□□ -0.1
Sssca1P56873 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sssca1P56873 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sssca1P56873 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sssca1P56873 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sssca1P56873 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sssca1P56873 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.43□□□□□ -0.1
Sssca1P56873 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sssca1P56873 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sssca1P56873 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sssca1P56873 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.43□□□□□ -0.1
Sssca1P56873 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sssca1P56873 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sssca1P56873 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Sssca1P56873 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sssca1P56873 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sssca1P56873 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.43□□□□□ -0.1
Sssca1P56873 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sssca1P56873 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.43□□□□□ -0.1
Sssca1P56873 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sssca1P56873 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sssca1P56873 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Sssca1P56873 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms