Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox3P53784 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox3P53784 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox3P53784 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox3P53784 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox3P53784 Gm2399-201ENSMUST00000104944 225 ntBASIC17.09■□□□□ 0.33
Sox3P53784 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.09■□□□□ 0.33
Sox3P53784 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.09■□□□□ 0.33
Sox3P53784 Gm5417-201ENSMUST00000079706 384 ntBASIC17.09■□□□□ 0.33
Sox3P53784 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sox3P53784 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox3P53784 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox3P53784 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox3P53784 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sox3P53784 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.09■□□□□ 0.33
Sox3P53784 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox3P53784 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox3P53784 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox3P53784 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox3P53784 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox3P53784 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox3P53784 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox3P53784 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sox3P53784 Gm7860-201ENSMUST00000121190 879 ntBASIC17.08■□□□□ 0.32
Sox3P53784 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.08■□□□□ 0.32
Sox3P53784 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sox3P53784 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox3P53784 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox3P53784 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sox3P53784 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox3P53784 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Sox3P53784 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Sox3P53784 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox3P53784 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox3P53784 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Sox3P53784 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox3P53784 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox3P53784 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox3P53784 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox3P53784 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.07■□□□□ 0.32
Sox3P53784 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox3P53784 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.07■□□□□ 0.32
Sox3P53784 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Sox3P53784 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.07■□□□□ 0.32
Sox3P53784 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox3P53784 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox3P53784 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox3P53784 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox3P53784 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox3P53784 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Sox3P53784 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox3P53784 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox3P53784 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox3P53784 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox3P53784 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox3P53784 Gm13158-201ENSMUST00000122007 736 ntBASIC17.06■□□□□ 0.32
Sox3P53784 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox3P53784 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox3P53784 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Sox3P53784 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox3P53784 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.06■□□□□ 0.32
Sox3P53784 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox3P53784 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox3P53784 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox3P53784 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox3P53784 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox3P53784 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Sox3P53784 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox3P53784 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sox3P53784 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox3P53784 Gm6659-201ENSMUST00000174752 547 ntBASIC17.05■□□□□ 0.32
Sox3P53784 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.05■□□□□ 0.32
Sox3P53784 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox3P53784 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox3P53784 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox3P53784 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox3P53784 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox3P53784 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox3P53784 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox3P53784 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sox3P53784 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox3P53784 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox3P53784 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox3P53784 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox3P53784 Gm10517-202ENSMUST00000192970 758 ntBASIC17.04■□□□□ 0.32
Sox3P53784 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Sox3P53784 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox3P53784 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox3P53784 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.04■□□□□ 0.32
Sox3P53784 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.04■□□□□ 0.32
Sox3P53784 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.04■□□□□ 0.32
Sox3P53784 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox3P53784 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox3P53784 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox3P53784 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox3P53784 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.03■□□□□ 0.32
Sox3P53784 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Sox3P53784 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox3P53784 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox3P53784 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms