Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
BdnfP21237 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.11■□□□□ 0.33
BdnfP21237 Gm15039-201ENSMUST00000118914 875 ntBASIC17.11■□□□□ 0.33
BdnfP21237 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
BdnfP21237 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.11■□□□□ 0.33
BdnfP21237 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
BdnfP21237 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
BdnfP21237 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
BdnfP21237 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.11■□□□□ 0.33
BdnfP21237 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
BdnfP21237 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BdnfP21237 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
BdnfP21237 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
BdnfP21237 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BdnfP21237 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BdnfP21237 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BdnfP21237 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BdnfP21237 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BdnfP21237 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BdnfP21237 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.1■□□□□ 0.33
BdnfP21237 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BdnfP21237 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BdnfP21237 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BdnfP21237 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BdnfP21237 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.1■□□□□ 0.33
BdnfP21237 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BdnfP21237 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.1■□□□□ 0.33
BdnfP21237 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BdnfP21237 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BdnfP21237 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BdnfP21237 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BdnfP21237 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.09■□□□□ 0.33
BdnfP21237 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
BdnfP21237 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 Nespas-201ENSMUST00000143738 1083 ntBASIC17.09■□□□□ 0.33
BdnfP21237 Gm6420-201ENSMUST00000193885 723 ntBASIC17.09■□□□□ 0.33
BdnfP21237 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.09■□□□□ 0.33
BdnfP21237 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BdnfP21237 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.09■□□□□ 0.33
BdnfP21237 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
BdnfP21237 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BdnfP21237 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
BdnfP21237 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
BdnfP21237 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BdnfP21237 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BdnfP21237 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
BdnfP21237 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.08■□□□□ 0.32
BdnfP21237 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.08■□□□□ 0.32
BdnfP21237 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BdnfP21237 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
BdnfP21237 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BdnfP21237 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BdnfP21237 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.08■□□□□ 0.32
BdnfP21237 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.08■□□□□ 0.32
BdnfP21237 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BdnfP21237 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BdnfP21237 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BdnfP21237 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.07■□□□□ 0.32
BdnfP21237 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BdnfP21237 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BdnfP21237 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BdnfP21237 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BdnfP21237 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BdnfP21237 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BdnfP21237 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BdnfP21237 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.07■□□□□ 0.32
BdnfP21237 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BdnfP21237 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BdnfP21237 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BdnfP21237 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BdnfP21237 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.06■□□□□ 0.32
BdnfP21237 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BdnfP21237 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BdnfP21237 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BdnfP21237 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BdnfP21237 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BdnfP21237 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BdnfP21237 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BdnfP21237 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BdnfP21237 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BdnfP21237 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
BdnfP21237 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BdnfP21237 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BdnfP21237 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms