Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rc3h2P0C090 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h2P0C090 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h2P0C090 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h2P0C090 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rc3h2P0C090 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Rc3h2P0C090 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rc3h2P0C090 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h2P0C090 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h2P0C090 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.19■□□□□ 0.5
Rc3h2P0C090 Gm30025-201ENSMUST00000218555 728 ntBASIC18.19■□□□□ 0.5
Rc3h2P0C090 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h2P0C090 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h2P0C090 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h2P0C090 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h2P0C090 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h2P0C090 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h2P0C090 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h2P0C090 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rc3h2P0C090 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.19■□□□□ 0.5
Rc3h2P0C090 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h2P0C090 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h2P0C090 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h2P0C090 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.18■□□□□ 0.5
Rc3h2P0C090 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h2P0C090 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Rc3h2P0C090 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Rc3h2P0C090 Gm3375-201ENSMUST00000203929 796 ntBASIC18.18■□□□□ 0.5
Rc3h2P0C090 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.18■□□□□ 0.5
Rc3h2P0C090 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h2P0C090 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rc3h2P0C090 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Rc3h2P0C090 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h2P0C090 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rc3h2P0C090 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rc3h2P0C090 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.17■□□□□ 0.5
Rc3h2P0C090 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h2P0C090 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Rc3h2P0C090 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h2P0C090 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rc3h2P0C090 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rc3h2P0C090 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h2P0C090 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h2P0C090 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.16■□□□□ 0.5
Rc3h2P0C090 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.16■□□□□ 0.5
Rc3h2P0C090 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.16■□□□□ 0.5
Rc3h2P0C090 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h2P0C090 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h2P0C090 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.16■□□□□ 0.5
Rc3h2P0C090 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h2P0C090 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.16■□□□□ 0.5
Rc3h2P0C090 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h2P0C090 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h2P0C090 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h2P0C090 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rc3h2P0C090 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Rc3h2P0C090 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rc3h2P0C090 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.15■□□□□ 0.5
Rc3h2P0C090 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rc3h2P0C090 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
Rc3h2P0C090 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rc3h2P0C090 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Rc3h2P0C090 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h2P0C090 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h2P0C090 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h2P0C090 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h2P0C090 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h2P0C090 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h2P0C090 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rc3h2P0C090 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h2P0C090 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h2P0C090 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h2P0C090 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Rc3h2P0C090 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h2P0C090 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h2P0C090 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.13■□□□□ 0.49
Rc3h2P0C090 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h2P0C090 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h2P0C090 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.13■□□□□ 0.49
Rc3h2P0C090 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h2P0C090 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rc3h2P0C090 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms