Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AL137060.1-201ENST00000618151 2648 ntBASIC20.74■□□□□ 0.91
RETP07949 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RETP07949 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RETP07949 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.73■□□□□ 0.91
RETP07949 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.73■□□□□ 0.91
RETP07949 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RETP07949 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RETP07949 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RETP07949 RPS2P55-201ENST00000397318 883 ntBASIC20.73■□□□□ 0.91
RETP07949 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.73■□□□□ 0.91
RETP07949 AC107956.1-201ENST00000494359 873 ntBASIC20.73■□□□□ 0.91
RETP07949 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RETP07949 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
RETP07949 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.73■□□□□ 0.91
RETP07949 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.73■□□□□ 0.91
RETP07949 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RETP07949 FBXW4P1-201ENST00000426721 2239 ntBASIC20.73■□□□□ 0.91
RETP07949 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RETP07949 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RETP07949 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RETP07949 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RETP07949 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.72■□□□□ 0.91
RETP07949 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RETP07949 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RETP07949 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RETP07949 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.72■□□□□ 0.91
RETP07949 AP001412.1-201ENST00000608405 714 ntBASIC20.72■□□□□ 0.91
RETP07949 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RETP07949 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RETP07949 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RETP07949 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.72■□□□□ 0.91
RETP07949 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RETP07949 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RETP07949 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.71■□□□□ 0.91
RETP07949 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RETP07949 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RETP07949 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.71■□□□□ 0.91
RETP07949 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RETP07949 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RETP07949 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RETP07949 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.71■□□□□ 0.91
RETP07949 TSPY7P-201ENST00000431358 1114 ntBASIC20.71■□□□□ 0.91
RETP07949 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
RETP07949 CDV3P1-201ENST00000471403 739 ntBASIC20.71■□□□□ 0.91
RETP07949 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.71■□□□□ 0.91
RETP07949 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.71■□□□□ 0.91
RETP07949 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
RETP07949 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RETP07949 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RETP07949 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RETP07949 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RETP07949 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RETP07949 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RETP07949 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RETP07949 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RETP07949 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.7■□□□□ 0.91
RETP07949 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RETP07949 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RETP07949 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RETP07949 POM121L13P-201ENST00000422362 380 ntBASIC20.7■□□□□ 0.9
RETP07949 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RETP07949 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.7■□□□□ 0.9
RETP07949 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.7■□□□□ 0.9
RETP07949 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.7■□□□□ 0.9
RETP07949 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.7■□□□□ 0.9
RETP07949 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.7■□□□□ 0.9
RETP07949 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.7■□□□□ 0.9
RETP07949 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.7■□□□□ 0.9
RETP07949 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RETP07949 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.69■□□□□ 0.9
RETP07949 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RETP07949 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RETP07949 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.69■□□□□ 0.9
RETP07949 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RETP07949 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RETP07949 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.69■□□□□ 0.9
RETP07949 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.69■□□□□ 0.9
RETP07949 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RETP07949 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
RETP07949 AC097493.4-201ENST00000641197 219 ntBASIC20.69■□□□□ 0.9
RETP07949 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
RETP07949 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RETP07949 AL024507.2-201ENST00000606070 2574 ntBASIC20.69■□□□□ 0.9
RETP07949 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RETP07949 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETP07949 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.68■□□□□ 0.9
RETP07949 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RETP07949 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETP07949 MCRIP2P1-201ENST00000394346 511 ntBASIC20.68■□□□□ 0.9
RETP07949 AC087499.1-201ENST00000418141 1075 ntBASIC20.68■□□□□ 0.9
RETP07949 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RETP07949 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.68■□□□□ 0.9
RETP07949 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.68■□□□□ 0.9
RETP07949 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETP07949 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RETP07949 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.68■□□□□ 0.9
RETP07949 MIR4785-201ENST00000585005 73 ntBASIC20.68■□□□□ 0.9
RETP07949 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
RETP07949 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RETP07949 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms