Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 MIR2861-201ENST00000636310 90 ntBASIC20.84■□□□□ 0.93
HLA-DQB2P05538 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HLA-DQB2P05538 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DQB2P05538 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.83■□□□□ 0.93
HLA-DQB2P05538 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DQB2P05538 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
HLA-DQB2P05538 FEM1AP1-201ENST00000431297 1995 ntBASIC20.83■□□□□ 0.93
HLA-DQB2P05538 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.83■□□□□ 0.93
HLA-DQB2P05538 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HLA-DQB2P05538 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.83■□□□□ 0.93
HLA-DQB2P05538 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
HLA-DQB2P05538 RAP2CP1-201ENST00000605103 478 ntBASIC20.83■□□□□ 0.93
HLA-DQB2P05538 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HLA-DQB2P05538 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.83■□□□□ 0.92
HLA-DQB2P05538 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HLA-DQB2P05538 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HLA-DQB2P05538 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
HLA-DQB2P05538 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HLA-DQB2P05538 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HLA-DQB2P05538 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 RARRES2P4-201ENST00000514074 484 ntBASIC20.82■□□□□ 0.92
HLA-DQB2P05538 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.82■□□□□ 0.92
HLA-DQB2P05538 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQB2P05538 AC073314.1-201ENST00000568729 2216 ntBASIC20.81■□□□□ 0.92
HLA-DQB2P05538 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQB2P05538 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.81■□□□□ 0.92
HLA-DQB2P05538 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQB2P05538 AC005181.1-201ENST00000604782 1256 ntBASIC20.81■□□□□ 0.92
HLA-DQB2P05538 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
HLA-DQB2P05538 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQB2P05538 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQB2P05538 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HLA-DQB2P05538 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQB2P05538 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
HLA-DQB2P05538 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DQB2P05538 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
HLA-DQB2P05538 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
HLA-DQB2P05538 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQB2P05538 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQB2P05538 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQB2P05538 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQB2P05538 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQB2P05538 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.8■□□□□ 0.92
HLA-DQB2P05538 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.8■□□□□ 0.92
HLA-DQB2P05538 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.8■□□□□ 0.92
HLA-DQB2P05538 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.8■□□□□ 0.92
HLA-DQB2P05538 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQB2P05538 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
HLA-DQB2P05538 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
HLA-DQB2P05538 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.8■□□□□ 0.92
HLA-DQB2P05538 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DQB2P05538 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
HLA-DQB2P05538 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HLA-DQB2P05538 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DQB2P05538 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DQB2P05538 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HLA-DQB2P05538 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.79■□□□□ 0.92
HLA-DQB2P05538 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms