Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IghmP01872 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
IghmP01872 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IghmP01872 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IghmP01872 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IghmP01872 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IghmP01872 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.75■□□□□ 0.27
IghmP01872 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IghmP01872 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
IghmP01872 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
IghmP01872 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
IghmP01872 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
IghmP01872 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
IghmP01872 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
IghmP01872 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
IghmP01872 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IghmP01872 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
IghmP01872 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
IghmP01872 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
IghmP01872 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IghmP01872 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IghmP01872 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IghmP01872 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IghmP01872 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.75■□□□□ 0.27
IghmP01872 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IghmP01872 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
IghmP01872 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IghmP01872 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IghmP01872 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.74■□□□□ 0.27
IghmP01872 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.74■□□□□ 0.27
IghmP01872 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IghmP01872 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.74■□□□□ 0.27
IghmP01872 Gm2399-201ENSMUST00000104944 225 ntBASIC16.74■□□□□ 0.27
IghmP01872 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.74■□□□□ 0.27
IghmP01872 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IghmP01872 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
IghmP01872 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
IghmP01872 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IghmP01872 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IghmP01872 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IghmP01872 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IghmP01872 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IghmP01872 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IghmP01872 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IghmP01872 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IghmP01872 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IghmP01872 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
IghmP01872 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IghmP01872 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IghmP01872 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.73■□□□□ 0.27
IghmP01872 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IghmP01872 Gm26524-201ENSMUST00000192339 390 ntBASIC16.73■□□□□ 0.27
IghmP01872 Gm42569-201ENSMUST00000200539 472 ntBASIC16.73■□□□□ 0.27
IghmP01872 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IghmP01872 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
IghmP01872 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IghmP01872 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
IghmP01872 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IghmP01872 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IghmP01872 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IghmP01872 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IghmP01872 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
IghmP01872 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.72■□□□□ 0.27
IghmP01872 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IghmP01872 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IghmP01872 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
IghmP01872 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.72■□□□□ 0.27
IghmP01872 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IghmP01872 Gm44549-201ENSMUST00000208351 577 ntBASIC16.72■□□□□ 0.27
IghmP01872 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.72■□□□□ 0.27
IghmP01872 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
IghmP01872 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IghmP01872 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IghmP01872 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.72■□□□□ 0.27
IghmP01872 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.72■□□□□ 0.27
IghmP01872 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IghmP01872 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IghmP01872 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.72■□□□□ 0.27
IghmP01872 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
IghmP01872 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IghmP01872 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IghmP01872 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
IghmP01872 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IghmP01872 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
IghmP01872 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IghmP01872 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IghmP01872 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IghmP01872 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IghmP01872 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IghmP01872 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
IghmP01872 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IghmP01872 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IghmP01872 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.71■□□□□ 0.27
IghmP01872 Gm13148-201ENSMUST00000118892 745 ntBASIC16.71■□□□□ 0.27
IghmP01872 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.71■□□□□ 0.27
IghmP01872 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IghmP01872 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IghmP01872 Zfp783-201ENSMUST00000095946 670 ntBASIC16.71■□□□□ 0.27
IghmP01872 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
IghmP01872 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms