Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rdh5O55240 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rdh5O55240 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.95■□□□□ 0.3
Rdh5O55240 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rdh5O55240 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rdh5O55240 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rdh5O55240 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rdh5O55240 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh5O55240 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rdh5O55240 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh5O55240 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh5O55240 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.94■□□□□ 0.3
Rdh5O55240 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh5O55240 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh5O55240 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh5O55240 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Rdh5O55240 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh5O55240 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.94■□□□□ 0.3
Rdh5O55240 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh5O55240 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh5O55240 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh5O55240 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rdh5O55240 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh5O55240 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rdh5O55240 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.93■□□□□ 0.3
Rdh5O55240 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh5O55240 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh5O55240 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh5O55240 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh5O55240 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.93■□□□□ 0.3
Rdh5O55240 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh5O55240 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.93■□□□□ 0.3
Rdh5O55240 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.93■□□□□ 0.3
Rdh5O55240 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh5O55240 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.93■□□□□ 0.3
Rdh5O55240 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh5O55240 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh5O55240 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rdh5O55240 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh5O55240 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rdh5O55240 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.93■□□□□ 0.3
Rdh5O55240 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh5O55240 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rdh5O55240 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
Rdh5O55240 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.92■□□□□ 0.3
Rdh5O55240 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh5O55240 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.92■□□□□ 0.3
Rdh5O55240 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.92■□□□□ 0.3
Rdh5O55240 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.92■□□□□ 0.3
Rdh5O55240 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh5O55240 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh5O55240 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh5O55240 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh5O55240 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh5O55240 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Rdh5O55240 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rdh5O55240 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh5O55240 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh5O55240 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh5O55240 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rdh5O55240 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh5O55240 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh5O55240 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh5O55240 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rdh5O55240 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.91■□□□□ 0.3
Rdh5O55240 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh5O55240 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh5O55240 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh5O55240 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh5O55240 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh5O55240 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rdh5O55240 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rdh5O55240 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh5O55240 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rdh5O55240 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh5O55240 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh5O55240 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh5O55240 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.9■□□□□ 0.3
Rdh5O55240 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh5O55240 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh5O55240 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh5O55240 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Rdh5O55240 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.9■□□□□ 0.3
Rdh5O55240 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.9■□□□□ 0.3
Rdh5O55240 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rdh5O55240 Gm20760-201ENSMUST00000179197 648 ntBASIC16.9■□□□□ 0.3
Rdh5O55240 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.9■□□□□ 0.3
Rdh5O55240 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rdh5O55240 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.9■□□□□ 0.3
Rdh5O55240 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh5O55240 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.9■□□□□ 0.3
Rdh5O55240 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.9■□□□□ 0.3
Rdh5O55240 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh5O55240 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh5O55240 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rdh5O55240 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rdh5O55240 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rdh5O55240 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rdh5O55240 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rdh5O55240 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms