Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm28043E0CXC2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Gm28043E0CXC2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28043E0CXC2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28043E0CXC2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Gm28043E0CXC2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28043E0CXC2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Gm28043E0CXC2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28043E0CXC2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.93■□□□□ 0.46
Gm28043E0CXC2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Gm28043E0CXC2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.93■□□□□ 0.46
Gm28043E0CXC2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28043E0CXC2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm28043E0CXC2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 Gm7514-201ENSMUST00000209475 934 ntBASIC17.92■□□□□ 0.46
Gm28043E0CXC2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm28043E0CXC2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm28043E0CXC2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Gm42569-201ENSMUST00000200539 472 ntBASIC17.9■□□□□ 0.46
Gm28043E0CXC2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm28043E0CXC2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gm28043E0CXC2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.89■□□□□ 0.46
Gm28043E0CXC2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28043E0CXC2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28043E0CXC2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28043E0CXC2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28043E0CXC2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28043E0CXC2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28043E0CXC2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Gm28043E0CXC2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm28043E0CXC2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Gm28043E0CXC2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.89■□□□□ 0.45
Gm28043E0CXC2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms