Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-4A0A0G2JG37 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9d-4A0A0G2JG37 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9d-4A0A0G2JG37 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav9d-4A0A0G2JG37 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm7860-201ENSMUST00000121190 879 ntBASIC12.27□□□□□ -0.45
Trav9d-4A0A0G2JG37 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-4A0A0G2JG37 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav9d-4A0A0G2JG37 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-4A0A0G2JG37 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-4A0A0G2JG37 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-4A0A0G2JG37 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-4A0A0G2JG37 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-4A0A0G2JG37 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav9d-4A0A0G2JG37 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-4A0A0G2JG37 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm5576-201ENSMUST00000075809 1236 ntBASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-4A0A0G2JG37 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Trav9d-4A0A0G2JG37 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-4A0A0G2JG37 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms