Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav4-2A0A075B638 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav4-2A0A075B638 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4-2A0A075B638 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4-2A0A075B638 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4-2A0A075B638 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4-2A0A075B638 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav4-2A0A075B638 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav4-2A0A075B638 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav4-2A0A075B638 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4-2A0A075B638 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trav4-2A0A075B638 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav4-2A0A075B638 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav4-2A0A075B638 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Gm12251-201ENSMUST00000117893 792 ntBASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav4-2A0A075B638 Idnk-204ENSMUST00000226010 1898 ntBASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav4-2A0A075B638 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav4-2A0A075B638 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav4-2A0A075B638 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms