Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Trim9Q8C7M3 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim9Q8C7M3 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim9Q8C7M3 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Gm13866-201ENSMUST00000118901 968 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Gm16129-201ENSMUST00000152628 486 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Gm22867-201ENSMUST00000157499 109 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Gm43382-201ENSMUST00000198954 838 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Gm43596-201ENSMUST00000202818 884 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Gm44954-201ENSMUST00000208513 227 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Gm45636-201ENSMUST00000210497 1064 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Gm20786-201ENSMUST00000212649 436 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trim9Q8C7M3 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Trim9Q8C7M3 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim9Q8C7M3 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
Trim9Q8C7M3 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Trim9Q8C7M3 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Trim9Q8C7M3 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.39
Trim9Q8C7M3 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Trim9Q8C7M3 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim9Q8C7M3 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.4□□□□□ -1.39
Trim9Q8C7M3 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Gm14772-201ENSMUST00000116562 514 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Gm14115-201ENSMUST00000119242 482 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Gm14805-201ENSMUST00000120172 340 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 n-R5s30-201ENSMUST00000122624 122 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Gm22599-201ENSMUST00000157597 132 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Gm23995-201ENSMUST00000158060 129 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Gm24303-201ENSMUST00000178237 126 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Gm7745-201ENSMUST00000182235 973 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Gm5066-201ENSMUST00000188479 822 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Gm412-201ENSMUST00000193360 948 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Gm42646-201ENSMUST00000202233 914 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 AC123835.1-201ENSMUST00000214362 670 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 AC142113.2-201ENSMUST00000217425 748 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Gm7042-201ENSMUST00000223027 384 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 AC131117.2-203ENSMUST00000225886 950 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Gm5612-201ENSMUST00000053326 375 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Olfr519-201ENSMUST00000084752 960 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim9Q8C7M3 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim9Q8C7M3 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 138.1 ms