Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Col17a1Q07563 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col17a1Q07563 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col17a1Q07563 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col17a1Q07563 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col17a1Q07563 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
Col17a1Q07563 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
Col17a1Q07563 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC8.94□□□□□ -0.98
Col17a1Q07563 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col17a1Q07563 AC122305.1-201ENSMUST00000214803 3921 ntBASIC8.94□□□□□ -0.98
Col17a1Q07563 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col17a1Q07563 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col17a1Q07563 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col17a1Q07563 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col17a1Q07563 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col17a1Q07563 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col17a1Q07563 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Col17a1Q07563 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col17a1Q07563 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col17a1Q07563 Gm37485-201ENSMUST00000192326 2953 ntBASIC8.94□□□□□ -0.98
Col17a1Q07563 Gm3978-201ENSMUST00000163406 2512 ntBASIC8.94□□□□□ -0.98
Col17a1Q07563 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC8.94□□□□□ -0.98
Col17a1Q07563 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col17a1Q07563 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC8.94□□□□□ -0.98
Col17a1Q07563 Gm4412-201ENSMUST00000186660 433 ntBASIC8.94□□□□□ -0.98
Col17a1Q07563 Gm42646-201ENSMUST00000202233 914 ntBASIC8.94□□□□□ -0.98
Col17a1Q07563 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC8.94□□□□□ -0.98
Col17a1Q07563 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Col17a1Q07563 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Col17a1Q07563 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Col17a1Q07563 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Col17a1Q07563 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col17a1Q07563 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Col17a1Q07563 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.94□□□□□ -0.98
Col17a1Q07563 Gm19093-201ENSMUST00000210671 1454 ntBASIC8.94□□□□□ -0.98
Col17a1Q07563 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Col17a1Q07563 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Col17a1Q07563 Gm37894-201ENSMUST00000195416 2599 ntBASIC8.93□□□□□ -0.98
Col17a1Q07563 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col17a1Q07563 Gm37738-201ENSMUST00000192396 4716 ntBASIC8.93□□□□□ -0.98
Col17a1Q07563 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col17a1Q07563 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Col17a1Q07563 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col17a1Q07563 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC8.93□□□□□ -0.98
Col17a1Q07563 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col17a1Q07563 Gm22758-201ENSMUST00000102275 96 ntBASIC8.93□□□□□ -0.98
Col17a1Q07563 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col17a1Q07563 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC8.93□□□□□ -0.98
Col17a1Q07563 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Col17a1Q07563 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Col17a1Q07563 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col17a1Q07563 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Col17a1Q07563 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC8.93□□□□□ -0.98
Col17a1Q07563 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col17a1Q07563 Gm29576-201ENSMUST00000188020 678 ntBASIC8.93□□□□□ -0.98
Col17a1Q07563 Gm28354-201ENSMUST00000190904 678 ntBASIC8.93□□□□□ -0.98
Col17a1Q07563 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC8.93□□□□□ -0.98
Col17a1Q07563 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC8.93□□□□□ -0.98
Col17a1Q07563 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Col17a1Q07563 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC8.93□□□□□ -0.98
Col17a1Q07563 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC8.93□□□□□ -0.98
Col17a1Q07563 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC8.93□□□□□ -0.98
Col17a1Q07563 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Col17a1Q07563 Gm43528-201ENSMUST00000199492 1674 ntBASIC8.93□□□□□ -0.98
Col17a1Q07563 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col17a1Q07563 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Col17a1Q07563 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col17a1Q07563 AC158115.1-201ENSMUST00000222830 3182 ntBASIC8.93□□□□□ -0.98
Col17a1Q07563 AC141476.1-201ENSMUST00000224988 3387 ntBASIC8.93□□□□□ -0.98
Col17a1Q07563 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col17a1Q07563 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Col17a1Q07563 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col17a1Q07563 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Col17a1Q07563 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col17a1Q07563 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col17a1Q07563 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col17a1Q07563 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC8.92□□□□□ -0.98
Col17a1Q07563 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Col17a1Q07563 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col17a1Q07563 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col17a1Q07563 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Col17a1Q07563 Gm25913-201ENSMUST00000157617 135 ntBASIC8.92□□□□□ -0.98
Col17a1Q07563 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC8.92□□□□□ -0.98
Col17a1Q07563 Gm8902-201ENSMUST00000174341 1096 ntBASIC8.92□□□□□ -0.98
Col17a1Q07563 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC8.92□□□□□ -0.98
Col17a1Q07563 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
Col17a1Q07563 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC8.92□□□□□ -0.98
Col17a1Q07563 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC8.92□□□□□ -0.98
Col17a1Q07563 AC116319.2-201ENSMUST00000228159 984 ntBASIC8.92□□□□□ -0.98
Col17a1Q07563 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Col17a1Q07563 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC8.92□□□□□ -0.98
Col17a1Q07563 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col17a1Q07563 AC164297.2-201ENSMUST00000224388 1508 ntBASIC8.92□□□□□ -0.98
Col17a1Q07563 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Col17a1Q07563 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Col17a1Q07563 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Col17a1Q07563 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC8.91□□□□□ -0.98
Col17a1Q07563 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC8.91□□□□□ -0.98
Col17a1Q07563 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC8.91□□□□□ -0.98
Col17a1Q07563 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms